Gene Rleg_6163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6163 
Symbol 
ID8016176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp209699 
End bp210703 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content63% 
IMG OID644827469 
Productinner-membrane translocator 
Protein accessionYP_002978669 
Protein GI241258785 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000865468 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGCTT ATACGGAACG CGGCCACGGC TCGCGCGTCG CCGATTTCTT CGGCGAACAC 
GCACAGGTCC TGTCGATCGC CATCTTCTTT CTGGCCTGCA TGATCTTCTT CTCGATCGGC
AGCGAAACCT TCTTCACGCT CGGCAACATC CTGAACATCG TGCGGCAGGC TGCTCCCATC
CTGATCGTCG CCATCGCCAT GACATTCGTC ATCATCACCG GCGGCATCGA TCTTTCGGTC
GGCTCGCAGG TCGCCCTCAT CAACGCGGTC GCGGCGATCG TTATGGCGAT GGGTGTTCCC
TGGCCGTCGG TGGTCATCGG CATGATCGTG CTCGGCGGCT TCATGGGACT GGTCCAGGGC
TGGTTTGTCG CCTATCAGGG CATCCCGGCC TTCATCGTGA CACTTGCCGG CCTATCGATC
CTGCGCGGTC TGGCGCTCTA TCTGACCCAG GGCTATTCCA TTCCGATCAA GGATGCGCCG
GGCTTCTTCG CGCTCGGCCG GGGCGAAATC CTCAGCTTCC CGATCCCGGC GATCATCGCC
GTCATCATCG CCATTCTCGG TTATGTCGTC ATCACCGCGA CCAAATATGG CCGGCAGGTC
GTGGCGGTCG GCTCCAATGC AGAGGCGGCG CGTCGCGTCG GCATGCCCGC CAAATGGATC
ATCGCCTCGG TCTACATCAT CTCCGGCGTC GCCTGCGCCG TCGCCGGCCT GCTGATCGCC
GCTCGCCTCG GCTCCGGTTC GTCCAATGCC GCCGTCGGCT TCGAGCTGCA GGTAATCGCC
GCCGTCGTGC TCGGCGGAAC GTCGCTGATA GGCGGACGCG GCACCATTCT CGGCACCGTA
CTCGGCACGC TGACCATCGC CGTCATCGGC AATGGCCTGA TCCTGATGCA CATATCGCCG
TTCTTCACCC AGATCGTCAC CGGCGCCATC ATTCTCGTCG CCATCTGGCT GAACACGCGC
ATCTTCACGG CCAATTTCCA CTTCCGGCTG GGCAGGAAAG GATGA
 
Protein sequence
MTAYTERGHG SRVADFFGEH AQVLSIAIFF LACMIFFSIG SETFFTLGNI LNIVRQAAPI 
LIVAIAMTFV IITGGIDLSV GSQVALINAV AAIVMAMGVP WPSVVIGMIV LGGFMGLVQG
WFVAYQGIPA FIVTLAGLSI LRGLALYLTQ GYSIPIKDAP GFFALGRGEI LSFPIPAIIA
VIIAILGYVV ITATKYGRQV VAVGSNAEAA RRVGMPAKWI IASVYIISGV ACAVAGLLIA
ARLGSGSSNA AVGFELQVIA AVVLGGTSLI GGRGTILGTV LGTLTIAVIG NGLILMHISP
FFTQIVTGAI ILVAIWLNTR IFTANFHFRL GRKG