| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6092 |
|---|
| Symbol | |
|---|
| ID | 8016049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012852 |
|---|
| Strand | + |
|---|
| Start bp | 127800 |
|---|
| End bp | 129002 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644827398 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002978598 |
|---|
| Protein GI | 241258714 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCG TTGCCGAGAG CGCGCCTCGT TTCGAAAAAA CAACCATGTC TATCCTGATG
GCGGTCAGCT TCTGCCACAT GTTGAACGAC ATCATGCAGT CGCTGCTCGC CTCACTCTAT
CCGCTGTTCA AGGCGAACTA CGATCTCGAT TTCGTGCAGA TCGGCCTCCT CACCATGACG
TTCCAGGTCA CGGCTTCGCT GCTGCAGCCG CTGGTCGGCA TCGTCACCGA CCGCTGGCCG
ATGCCCTATT CGCTGCCGGT CGGCATGGCC AGCACCTTTT GCGGCCTCAT TCTGCTCGGC
AATGCCGGCA GCTTCACCCT GCTACTGGTT GCCGCAAGCC TGATCGGCTT CGGCTCGGCG
GTCTTCCACC CGGAATCTTC GCGTGTTGCC CGTCTTGCCT CTGGCGGCCG CCACGGTTTC
GCACAATCCT TCTTCCAGGT CGGTGGCAAT GCCGGCCAGG CGATCGGTCC GCTGCTTGCC
GCCTTCATCG TGCTGCCGCT CGGTCAGCAC AGCGTCTCCT GGTTCGCCGC CATCGCCATG
GTCGGCATGG TCGTGCTAAG CTGGGTCGGC AACTGGTACA TCAGCCACAG GCGCCAGAAT
GCCAGCAAGC CGGCAATAAG CCGGACCCTG CCGCTGCCGC AGAACAGGGT CGTCTGGGCG
CTGCTCATCC TCGTGCTGCT GACGGCAACG AAGAATGTCT ACATGGCCAG CGTATCGAGC
TACTTCACCT TCTATGTCAT CGACAAGTTC GAACTCAGCG TGCAGCAGGC ACAGCTGATG
CTCTTCCTGT TCCTCGGTTC GGTCGCCGTC GGCACTTTCC TCGGCGGGCC GATCGGTGAC
CGCTTCGGTG CCCGTTTTGT CATCTGGTTC TCGATCCTCG GCGTCATTCC CTTCGCGCTC
CTGCTTCCCT ATGCCAACCT TTTCTGGACG GGTGTGCTCA GCGTCGTCAT CGGCCTGATC
TTCGCTTCGG CCTTCTCTGC AATCGTCGTC TTCGCGCAGG AACTGGTGCC CGGGCGCGTC
GGGTTGATTG CCGGGGTCTT CTTCGGCTTC GCATTCGGGG CAGGGGGGCT TGGCGCAGCC
CTGCTCGGCA GTTTCGCCGA CACCCATGGC ATCGATTTCG TCTACCGCAT CTGCTCCTAC
CTGCCGCTGC TCGGTCTCCT CACGGTCTTC CTGCCGCGTA TTCCCAAGCA GAAACCAGTC
TGA
|
|---|
| Protein sequence | MATVAESAPR FEKTTMSILM AVSFCHMLND IMQSLLASLY PLFKANYDLD FVQIGLLTMT
FQVTASLLQP LVGIVTDRWP MPYSLPVGMA STFCGLILLG NAGSFTLLLV AASLIGFGSA
VFHPESSRVA RLASGGRHGF AQSFFQVGGN AGQAIGPLLA AFIVLPLGQH SVSWFAAIAM
VGMVVLSWVG NWYISHRRQN ASKPAISRTL PLPQNRVVWA LLILVLLTAT KNVYMASVSS
YFTFYVIDKF ELSVQQAQLM LFLFLGSVAV GTFLGGPIGD RFGARFVIWF SILGVIPFAL
LLPYANLFWT GVLSVVIGLI FASAFSAIVV FAQELVPGRV GLIAGVFFGF AFGAGGLGAA
LLGSFADTHG IDFVYRICSY LPLLGLLTVF LPRIPKQKPV
|
|---|
| |