Gene Rleg_6001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6001 
Symbol 
ID8016267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp29007 
End bp29729 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content63% 
IMG OID644827313 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002978513 
Protein GI241258629 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCAAG CATCAGAAAC TGAAGTTTTG GTCGCCCCGG CTTTGCGGGA GGTCGGGGGC 
AGGCTGCGCC GGATCACCAC AGCCGGCGCC ATCTACGATC GCCTCTATGC AGACATCGTG
TCGCTGCGGA TGCCGCCCGG TATGCTGCTG CAGGAAAAGC GGATCGCCGA TGATTTCGGC
GTTAGCCGCA CGCCGGTGCG CGAGGCGCTG CTCCGGCTTT CCGAAGGCGG ACTGATCGAT
ATCTACCCAC AATCGGGCAC CGTCGTGTCG CGGGTGCCGG TCTCGGCGAT CCCTGAGGCA
GTTGTCGTGC GCAAGGCGCT TGAAGGCACG ACGGTCGAGG CTGCGGCGCT GACCGCCTCC
GCCACCGATA TCGCTCGTCT CGATACCATC ATTGCCCGGC AGCGGGCGCA TGCCGCGACC
GGCAATGCCT CGAGCTTCCA TGAGGAGGAC GAGGCCTTCC ATGAGGCGAT CACGCAGATA
TCGGGTTATC CCGGCATCTG GGCAATCCTG AAAACGGTCA AGGTGCAGAT CGACCGGGCA
CGGCGCCTGA CGTTACCGGT GCTTGGGCGC ATGGATAATG TCGTGCAGGA ACACATGATC
ATCCGCGATG CACTCGCCGC CCATGATGCG GCGGTTGCAC GCAGCGCGAT GACCCATCAT
CTGAGTGCCG TCATTCCCGA TGTCGACGAG TTGCGCGCGC GTTACCCCGA TTATTTCTGC
TGA
 
Protein sequence
MRQASETEVL VAPALREVGG RLRRITTAGA IYDRLYADIV SLRMPPGMLL QEKRIADDFG 
VSRTPVREAL LRLSEGGLID IYPQSGTVVS RVPVSAIPEA VVVRKALEGT TVEAAALTAS
ATDIARLDTI IARQRAHAAT GNASSFHEED EAFHEAITQI SGYPGIWAIL KTVKVQIDRA
RRLTLPVLGR MDNVVQEHMI IRDALAAHDA AVARSAMTHH LSAVIPDVDE LRARYPDYFC