Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5997 |
Symbol | |
ID | 8016263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012852 |
Strand | - |
Start bp | 23945 |
End bp | 25534 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644827309 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_002978509 |
Protein GI | 241258625 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.378354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACCA TCGCAGCAAC ATCAATCGCC GTTCCGCAGC CGAAAACCGG CGCCAGTACC AGGGAATGGA TCGCCGTTCT CGCCGGCATG ATCGGCGCCT TCATGGCGAT CCTCAACATC CAGATCACCA ATGCCTCGCT TCTCGACATC GAGGGCGGCA TCGGAACAGG CGTCGACAAC GGCGCCTGGA TCTCCACCTC CTATCTGATT GGCGAGATCG TCGTTATCCC GCTGACGGCC TATTTCAGCA ATGTCTTCTC TTTCCGCCGC TACATCCTCG TCAACTCAGT CCTCTTCCCG CTGTTTTCGA TTGGCTGTGC CTTCGCCCAT GATCTCGGCA CGATGATCGT GCTGCGCGGC CTGCAGGGTT TTGCCGGCGG CGTGCTGATC CCCATGGCCT TCACCATGGT GCTGACCAAG CTGCCGAAGC ACCAGCAGCC GCTCGGCCTT GCGGCCTTCG CGCTCTCGGT CACCTTCGCG CCGGCGATCG GCCCGACCAT CGGCGGTTAT CTCACCGAAA ACTATGGCTG GCAGACGATC TTCTTCATCA ACGCCATCCC CAGCGCCATC ATGGCGGTCG CCCTTGCCCT GACGCTCGAC AAGCAGCCGA TGCAGCTCGG CCTGCTCAGG GAAGGTGACT GGGCGGGGAT CATCAGCATG GCGATCGGCC TCTCGGCGCT GCAGACGGTG CTCGAAGAAG GCAACAAGGA GGACTGGTTC TCCTCGCCCT TCATCGTCAA GCTGAGCATC CTCGCCTTCG TCTTCCTCGT CGCCTTCATC TGGATCGAGC TGACGGTGGA GAAGCCGCTG GTCAAGCTGC GCCTGCTTAA GCAGCGCAAT TTCGGCATCG GCGTTGCCGT CAACGTGCTG GTCGGCGTCG CCCTTTTCGG CACCGTCTAT ATCCTGCCGC AATATCTCGG CCAGGTGCAG CGCTATAATG CCGAGCAGAT CGGCAATGTG CTGGCATGGA CCGGCCTGCC GCAGCTGCTT TTGATCCCGC TCGTGCCGAT GATGATGAAG CGCTTCGATG CGCGTTACAT CGGCTTCCTC GGCATCTCGA TCTTCGCGAT CAGCTGCTTC ATGAACATCA CCTTGTCAGC CGATACCGCA GGCGACCAGT TCTGGATCCC GAACATCGTC CGCGCCATCG GCCAGGCGCT GGTGCTGACG CCGATCACCG CGATCACCAC TGCCGGCATC GCGCCTTCCG ATGCGGCCGC CGCCTCGGGC CTCACCAACA TGCTGCGCAA TCTCGGCGGC GCCGTCGGCA CGGCAACGCT CGGCACGGTG CTGACCAAAC GCGAGCAGTT TCACTCGAAC ATCATCGGCC AGTCGGTGAC GCTCGGCCGT GACGAAGTGC GCAACCGCCT CGACCAGTTG ACAGGCTACT TCCTGCAGCA TGGTGTTTCC GACCATGCCG TAGCAACCCA GAAGGCTATC GTGGCGCTTG GGCAGGTCGT CAAACGCCAG GCCCTGATCC TGGGTTTTGC CGATACCTTC GCCGTCATCG GCGTGGTTCT TGCCATTGCA GCCGTCGCCC TTCTGCTCAC CCAAAAACCG CGGGCCGGTG GTGGCGCCGG CGCTCATTGA
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Protein sequence | MSTIAATSIA VPQPKTGAST REWIAVLAGM IGAFMAILNI QITNASLLDI EGGIGTGVDN GAWISTSYLI GEIVVIPLTA YFSNVFSFRR YILVNSVLFP LFSIGCAFAH DLGTMIVLRG LQGFAGGVLI PMAFTMVLTK LPKHQQPLGL AAFALSVTFA PAIGPTIGGY LTENYGWQTI FFINAIPSAI MAVALALTLD KQPMQLGLLR EGDWAGIISM AIGLSALQTV LEEGNKEDWF SSPFIVKLSI LAFVFLVAFI WIELTVEKPL VKLRLLKQRN FGIGVAVNVL VGVALFGTVY ILPQYLGQVQ RYNAEQIGNV LAWTGLPQLL LIPLVPMMMK RFDARYIGFL GISIFAISCF MNITLSADTA GDQFWIPNIV RAIGQALVLT PITAITTAGI APSDAAAASG LTNMLRNLGG AVGTATLGTV LTKREQFHSN IIGQSVTLGR DEVRNRLDQL TGYFLQHGVS DHAVATQKAI VALGQVVKRQ ALILGFADTF AVIGVVLAIA AVALLLTQKP RAGGGAGAH
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