Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5661 |
Symbol | |
ID | 8016887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | - |
Start bp | 240977 |
End bp | 242401 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644827815 |
Product | RND efflux system, outer membrane lipoprotein, NodT family |
Protein accession | YP_002979015 |
Protein GI | 241518387 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.434988 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATAG TTTTCTCCTC AGTTTCCATC CTCGCCATTT TGGCGGTACT CAGCGGTTGT ACCAGTCTTG GCGCACTCAA ACCTTCGAGG TCTGTCGTGG CGCCCTATTG GCACGCGACA CTGCCGCACG GAGGTCGCTC CCCCGAGCTC GTCGCGTGGT GGGCAAGCTT TAAAGATCCT TCGCTGACGG AGTTACTGAC GCTGGCTGAA CGGGAAAATC CCACGGTTCA GGAAGCTGTC GCCAACATTG ACAAGGCGCG TGCGACGCTC GATAGCGCAA GGGCTGGCCT CTTCCCGTCG CTGGACGGGT CCGCCTCGGC AACGCGCGAG GCTAACACCG GGGACGACCT CAACAAAATC GTGGCTGGAA CGAACAGGAG TGGCGGTCTC GACGCCGCCT GGGAACTCGA TTTGTTCGGC AAGACCAAGA AAGAGACACA GGCCGCGGCC TTACGAGCCC AGGGCAAGGT CTGGTCGTGG CATGACGCGC GGATTTCGGT CGCTGCCGAG GTCGGTGATT ACTATGTCCA ATATCGCGCC TGTCGTCAGT TGGAACAGCT TTACCGTGAT GAGCTTGCAT CGCAGAGAGA AACGATACTC GCGACTGAAA AATCGGCGCA GTCCGGCTTT ACATCAACAG CCGATCTGGC GCTCTCCCGA GCGAGCGCTG CGACATCCTC TTCCAATCTG ACGGCCCAGC GCGGGGACTG CGAAATCATC GTCAAGTCAT TGGTCCAACT GACGGCCACC GATGAGTTGG TGATCAAAAC ATTGCTGGAT CACGGTAAAA GTCGCATTCC ACAGCCGTCA TCGTTGCGGA TCGTCTCTGT ACCGGCGGAT GTTTTGCGAC AAAGGCCCGA CATCAACGCG CTGGAAGCGG AAGTCGCGGC AACGATTTCA GATGTCGGCG CTGCGAAGGC CGACCTCTAT CCCAGTCTCA GCTTGAGTGG ATCCATCTCA ATCAGCCAGT CCACCGTAAC CGGCAGATCG GTTCCGTGGT CATTTGGGCC CGCATTGTCG ATACCGCTGT TTGATGGCGG CACTAAAAGG GCTGCCGTCA GAAGCGCAGT TGCGGATTAC GATGTTGCTG TCGCAAGTTA CAAGTCCGGC GTCTTGACGG CCGTCGCCGA CGTGGAGACA GCTCTTATTC GTGTCAACAC GGCTCTGAAG CGTATCGGCG ATGCAAAGAC CGCCGCTGAC AATTATCAAA GCTACTTCCG CTCGGTCGAT GAGAACTGGA AATCCGGTGG CGCCAGTATC CTCGACCGGG AGGAGGCCCG TCGTTCGGCA CAGTCCGCCG CCATCACCCT CATCGAAATC AGGCGCGACG CGGTCCAGTA TTGGATCGCC CTCTACAAGT CTCTCGGCGG CGGCTGGGCT GCCCCGGCTG GCGCGCCAAT TGCCTCTGCC AATGGAACCC ACTGA
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Protein sequence | MRIVFSSVSI LAILAVLSGC TSLGALKPSR SVVAPYWHAT LPHGGRSPEL VAWWASFKDP SLTELLTLAE RENPTVQEAV ANIDKARATL DSARAGLFPS LDGSASATRE ANTGDDLNKI VAGTNRSGGL DAAWELDLFG KTKKETQAAA LRAQGKVWSW HDARISVAAE VGDYYVQYRA CRQLEQLYRD ELASQRETIL ATEKSAQSGF TSTADLALSR ASAATSSSNL TAQRGDCEII VKSLVQLTAT DELVIKTLLD HGKSRIPQPS SLRIVSVPAD VLRQRPDINA LEAEVAATIS DVGAAKADLY PSLSLSGSIS ISQSTVTGRS VPWSFGPALS IPLFDGGTKR AAVRSAVADY DVAVASYKSG VLTAVADVET ALIRVNTALK RIGDAKTAAD NYQSYFRSVD ENWKSGGASI LDREEARRSA QSAAITLIEI RRDAVQYWIA LYKSLGGGWA APAGAPIASA NGTH
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