Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5559 |
Symbol | |
ID | 8016450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | - |
Start bp | 144225 |
End bp | 145253 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644827726 |
Product | hypothetical protein |
Protein accession | YP_002978926 |
Protein GI | 241518298 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.472868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0109335 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGGCC ATTCGAGAGA AAAACTGCAT GGGGATTTGC CCTCCGCATC TTCAAAAGCA GCTTCCGCCG ATCGGAAAGA GCTGGCAGCG ATCGCATTTG AACGGACCAG GATGCCAATG GTCGTCACCG ACGCGCGTAA GTCCGATCAG CCGATCGTGC TTGCAAACAA GGCATTCCTC GAGCTGACAG GTTACGAGGC CGAAGAAGTG TTAGGCCACA ACTGTCGTTT CCTGCAGGGC CCCGCGACGT CTCCGATCGC CGCCGCTGAA ATTCGTGCCG CAATCGCCGG GGAGCGTGAG ATCAGCATCG AGATCCTCAA TTATAAGAAG AGCGGAGAGC AGTTCTGGAA CCGCTTGCAT CTCAGTCCCG TCCATGGGGA TGACGGAAGG ATCCTGTATT TCTTTGGATC TCAAATCGAC ATGACGGAAT ACCGGCGGAT CGAGGCACTG GAGGCCTCCG AACATCGCCT GCTGATGGAA GTCGACCACC GATCCAAGAA TGTCCTGGCG ATCGTCGACA GCATCGTTCG CCTGAGCAAC GCCGATGACC CCGCCCTTTA CGCCGCCGCC ATTCAACACC GCGTGCAGGC GCTCGCCCGT GCCCATACCT TGCTTGCCGC ACGAAGATGG ACAAGCATTT CTCTTGAAGA ACTCATTCGC CAACAGGTAT CGCCGTTCGC GGCCACCCGC ACCTTTTTTA GCGGACCGGA TATCGACATG CCTGCGCCGG CCGTCCAGCC CCTTGCGCTC GTGCTCCACG AGCTCGCCGT CAACGCAGCC CATCACGGTG CGCTTGCCGC TGCGCAAGGT AGGCTTTCGA TCAGTTGGAA GCCCGGACCG TCCGGAGCCG GCTTCAGGAT CCGGTGGCAG GAGGTGGGCG TCGACACTCC GCCTAGATCA GCAAAGCGGG GTTTTGGCAC GGTGATTGTC GGCGCAATGG TTGAAAAACA GCTTAACGGA CGTCTTGAGA AAACCTGGTC GGATGAAGGG CTGCTTATCG ACATTGAGGT CCCGTCTGCC GGCTCGTGA
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Protein sequence | MTGHSREKLH GDLPSASSKA ASADRKELAA IAFERTRMPM VVTDARKSDQ PIVLANKAFL ELTGYEAEEV LGHNCRFLQG PATSPIAAAE IRAAIAGERE ISIEILNYKK SGEQFWNRLH LSPVHGDDGR ILYFFGSQID MTEYRRIEAL EASEHRLLME VDHRSKNVLA IVDSIVRLSN ADDPALYAAA IQHRVQALAR AHTLLAARRW TSISLEELIR QQVSPFAATR TFFSGPDIDM PAPAVQPLAL VLHELAVNAA HHGALAAAQG RLSISWKPGP SGAGFRIRWQ EVGVDTPPRS AKRGFGTVIV GAMVEKQLNG RLEKTWSDEG LLIDIEVPSA GS
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