Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5536 |
Symbol | |
ID | 8016427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | - |
Start bp | 123406 |
End bp | 124269 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644827703 |
Product | inner-membrane translocator |
Protein accession | YP_002978903 |
Protein GI | 241518275 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0898761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00000762258 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACTGGC TTGATACCAT TCTCCAGGGC GTGCTGCTCG GCGGGCTCTA CGCGCTGTTT GCGGCGGGGC TCAGTCTCAT CTTCGGCATC ATGCGGCTGG TCAACCTCGC CCATGGCGAT CTGATCGTGC TTGCCGCCTT CCTGATCCTG GTCCTGGTGA CGACGCTCGG GCTCAATCCG TTCGTTGCCG CCGCGATCGC GATGCCGTTG ATGTTCGCGA TCGGCTGGGG ACTGCAATAT TTCCTGCTCA ACCGCACGCT CGGCAAGGAT ATCCTGCCGC CGCTGCTTGT CACTTTCGGC CTGTCGATCG TCATCCAGAA CGGCCTGCTC GAAGGATTTT CGGCCGATAG CCGCCGTGTC TTTGCCGGGA GCCTAGAAAG CGCCTCCGTC AATCTCGGCC CGGTCACCGC CGGCATCATG CCGCTGATGA CCTTCTTTTC CGCCGTCGCC GTCATCGTCT GTCTCAACCA GCTCATCTAC CGCACCTCCG TCGGCCGCGC CTTCCGGGCG ACCTCGGACG ATCCGGTGAC GGCCGGGCTG ATGGGCATCC GGCCGCAACG TATCTTCGCC ATGGCGACAG GGCTTGCCAT GGTCGTGGTG ACGATCGCTG CCCTTTATCT CGGGACCCGC GCCAATTTCG ATCCGACGTC GGGACCGGCG CGGCTGATCT ATGCCTTCGA AGCGGTGATC ATCGGCGGGC TCGGCTCGCT CTGGGGCACG CTCGCCGGCG GCATCATCCT TGGCGTTGCC CAGACGGTGG GTGCCGCGAT CAATCCGGAG TGGCAGATCC TTGCCGGCCA CCTGGCATTC CTCGCCGTTC TCCTGTTCAA GCCGCGCGGC CTTTTCCCGC GCGCGGTGGA TTGA
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Protein sequence | MNWLDTILQG VLLGGLYALF AAGLSLIFGI MRLVNLAHGD LIVLAAFLIL VLVTTLGLNP FVAAAIAMPL MFAIGWGLQY FLLNRTLGKD ILPPLLVTFG LSIVIQNGLL EGFSADSRRV FAGSLESASV NLGPVTAGIM PLMTFFSAVA VIVCLNQLIY RTSVGRAFRA TSDDPVTAGL MGIRPQRIFA MATGLAMVVV TIAALYLGTR ANFDPTSGPA RLIYAFEAVI IGGLGSLWGT LAGGIILGVA QTVGAAINPE WQILAGHLAF LAVLLFKPRG LFPRAVD
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