Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5505 |
Symbol | |
ID | 8016396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | - |
Start bp | 91518 |
End bp | 92606 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644827672 |
Product | spermidine/putrescine ABC transporter ATPase subunit |
Protein accession | YP_002978872 |
Protein GI | 241518244 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.690258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0976565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCA TCGATATTGA ACTCGTCTCC GTCAGCAAGT CCTTCGGGGC GATCTCCGTC GTGAAGGACA TCAGCTTGCA GATCCCGCAG GGTGAGTTCG TCAGTATTCT CGGACCCTCC GGCTGCGGGA AGACGACAAC GCTCAACATG ATCGCCGGCT TCAACCAGCC GTCGTTCGGC GATATCAGGA TCCGCGGGAG GAGCCAGGGC CGCGTTCCAC CAGAACGGCG AAATATCGGA CTGGTGTTCC AGAACTACGC GCTTTTTCCG CACATGACGG TCGCCGACAA CGTCGGTTTT GGCCTCAAGA TGAAGAGCGT GGCGCGATCG GAGATCGAAA GCGGCGTGGC GTCGGCGCTG CGAAGTGTTC ATCTTGAAGA CTACGGCGCG CGCTATCCGA GGGAATTGTC GGGTGGACAG CAGCAACGCG TGGCTCTGGC GCGTGCCATT GCGCCACGCC CATCCGTCCT GCTCCTCGAC GAGCCGCTCT CGAATCTCGA TCTGAAGCTT CGAGAGGCCA TGCGGCTCGA ACTGAAGGAA CTCCAGCAGC AGCTGGGCAT GACGTTCGTC TACGTGACGC ACGACCAGGA AGAAGCGATG GCGATGTCCG ACCGGATCGT GGTGATGTGG CAGGGGGTCA TTGCCCAAAC GGGCGGGCCT GCTTCGATCT ACCGTCATCC GGCGAGCTCA TTCGTGGCGG ATTTCATCGG GAAATCGAAC ATCCTCACCA TCGAAGGGAC GAGTGAGCAG GAAGCCACCC TCGACCTTCA CCTGTCCGGG AGCGCGATCA GCTTGCGGGC GAAGCGCCCG CCGAACCGTC AGCAAGCCCG CTTCTGCTGC ATCCGGCCCG AAGACATCGC GGTGCTGAAC AACACCGGCG ACGCCGGCGG GTGCGGCGTC AATCGTCTGT CCGGAACCGT CCGCCGGGTC ATCAACCTCG GTCCGTCGCT GGAGCTCGCG GTCGAGATCG ATCCGCAGGT CGTCTTGACG GTGCTCACAC GCTCATCGCT GTCGGCCTCA CTTCCAGTTA TCGGCGACGT CGTTGCGCTT TCCATCGATC CAGACGACAT CCAGGTCCTG CCGGAATAG
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Protein sequence | MSSIDIELVS VSKSFGAISV VKDISLQIPQ GEFVSILGPS GCGKTTTLNM IAGFNQPSFG DIRIRGRSQG RVPPERRNIG LVFQNYALFP HMTVADNVGF GLKMKSVARS EIESGVASAL RSVHLEDYGA RYPRELSGGQ QQRVALARAI APRPSVLLLD EPLSNLDLKL REAMRLELKE LQQQLGMTFV YVTHDQEEAM AMSDRIVVMW QGVIAQTGGP ASIYRHPASS FVADFIGKSN ILTIEGTSEQ EATLDLHLSG SAISLRAKRP PNRQQARFCC IRPEDIAVLN NTGDAGGCGV NRLSGTVRRV INLGPSLELA VEIDPQVVLT VLTRSSLSAS LPVIGDVVAL SIDPDDIQVL PE
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