Gene Rleg_5505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5505 
Symbol 
ID8016396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp91518 
End bp92606 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content62% 
IMG OID644827672 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_002978872 
Protein GI241518244 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.690258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0976565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA TCGATATTGA ACTCGTCTCC GTCAGCAAGT CCTTCGGGGC GATCTCCGTC 
GTGAAGGACA TCAGCTTGCA GATCCCGCAG GGTGAGTTCG TCAGTATTCT CGGACCCTCC
GGCTGCGGGA AGACGACAAC GCTCAACATG ATCGCCGGCT TCAACCAGCC GTCGTTCGGC
GATATCAGGA TCCGCGGGAG GAGCCAGGGC CGCGTTCCAC CAGAACGGCG AAATATCGGA
CTGGTGTTCC AGAACTACGC GCTTTTTCCG CACATGACGG TCGCCGACAA CGTCGGTTTT
GGCCTCAAGA TGAAGAGCGT GGCGCGATCG GAGATCGAAA GCGGCGTGGC GTCGGCGCTG
CGAAGTGTTC ATCTTGAAGA CTACGGCGCG CGCTATCCGA GGGAATTGTC GGGTGGACAG
CAGCAACGCG TGGCTCTGGC GCGTGCCATT GCGCCACGCC CATCCGTCCT GCTCCTCGAC
GAGCCGCTCT CGAATCTCGA TCTGAAGCTT CGAGAGGCCA TGCGGCTCGA ACTGAAGGAA
CTCCAGCAGC AGCTGGGCAT GACGTTCGTC TACGTGACGC ACGACCAGGA AGAAGCGATG
GCGATGTCCG ACCGGATCGT GGTGATGTGG CAGGGGGTCA TTGCCCAAAC GGGCGGGCCT
GCTTCGATCT ACCGTCATCC GGCGAGCTCA TTCGTGGCGG ATTTCATCGG GAAATCGAAC
ATCCTCACCA TCGAAGGGAC GAGTGAGCAG GAAGCCACCC TCGACCTTCA CCTGTCCGGG
AGCGCGATCA GCTTGCGGGC GAAGCGCCCG CCGAACCGTC AGCAAGCCCG CTTCTGCTGC
ATCCGGCCCG AAGACATCGC GGTGCTGAAC AACACCGGCG ACGCCGGCGG GTGCGGCGTC
AATCGTCTGT CCGGAACCGT CCGCCGGGTC ATCAACCTCG GTCCGTCGCT GGAGCTCGCG
GTCGAGATCG ATCCGCAGGT CGTCTTGACG GTGCTCACAC GCTCATCGCT GTCGGCCTCA
CTTCCAGTTA TCGGCGACGT CGTTGCGCTT TCCATCGATC CAGACGACAT CCAGGTCCTG
CCGGAATAG
 
Protein sequence
MSSIDIELVS VSKSFGAISV VKDISLQIPQ GEFVSILGPS GCGKTTTLNM IAGFNQPSFG 
DIRIRGRSQG RVPPERRNIG LVFQNYALFP HMTVADNVGF GLKMKSVARS EIESGVASAL
RSVHLEDYGA RYPRELSGGQ QQRVALARAI APRPSVLLLD EPLSNLDLKL REAMRLELKE
LQQQLGMTFV YVTHDQEEAM AMSDRIVVMW QGVIAQTGGP ASIYRHPASS FVADFIGKSN
ILTIEGTSEQ EATLDLHLSG SAISLRAKRP PNRQQARFCC IRPEDIAVLN NTGDAGGCGV
NRLSGTVRRV INLGPSLELA VEIDPQVVLT VLTRSSLSAS LPVIGDVVAL SIDPDDIQVL
PE