Gene Rleg_5483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5483 
Symbol 
ID8016792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp69390 
End bp69770 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content61% 
IMG OID644827651 
ProductConjugal transfer protein TrbC 
Protein accessionYP_002978851 
Protein GI241518223 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3838] Type IV secretory pathway, VirB2 components (pilins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTTG AACGCTCGAT AGACCTCGCC GCCATCGCGC TTGTATTGGC CTTCATCCTT 
GCCGACCCGG CTTGGGCAAG TTCGGGCGGC GGCCTGCCCT GGGAAGATCC TCTTCAACAA
ATCCAAGAAT CGATCACCGG TCCGGTTGCC GGGTTTATCG CGCTTGCTGC TGTCGCAATC
GCAGGCGGCA TGTTGATCTT CGGCGGAGAA CTCAACGACT TCGCACGCCG GCTCATGTAC
GTGGTGCTCG TTGCCGGCAT TCTGCTTGGC GCGACCCAGA TCGTCGCCCT TTTTGGCGCG
ACCGGCGCCT CTATCGGCAT TGCCGATCAC AAGCTGAAGG CCCGCGATGG CGAAGAGGGG
AGGGCAGGTA ATGGCGGTTG A
 
Protein sequence
MRLERSIDLA AIALVLAFIL ADPAWASSGG GLPWEDPLQQ IQESITGPVA GFIALAAVAI 
AGGMLIFGGE LNDFARRLMY VVLVAGILLG ATQIVALFGA TGASIGIADH KLKARDGEEG
RAGNGG