Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5483 |
Symbol | |
ID | 8016792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | + |
Start bp | 69390 |
End bp | 69770 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644827651 |
Product | Conjugal transfer protein TrbC |
Protein accession | YP_002978851 |
Protein GI | 241518223 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCTTG AACGCTCGAT AGACCTCGCC GCCATCGCGC TTGTATTGGC CTTCATCCTT GCCGACCCGG CTTGGGCAAG TTCGGGCGGC GGCCTGCCCT GGGAAGATCC TCTTCAACAA ATCCAAGAAT CGATCACCGG TCCGGTTGCC GGGTTTATCG CGCTTGCTGC TGTCGCAATC GCAGGCGGCA TGTTGATCTT CGGCGGAGAA CTCAACGACT TCGCACGCCG GCTCATGTAC GTGGTGCTCG TTGCCGGCAT TCTGCTTGGC GCGACCCAGA TCGTCGCCCT TTTTGGCGCG ACCGGCGCCT CTATCGGCAT TGCCGATCAC AAGCTGAAGG CCCGCGATGG CGAAGAGGGG AGGGCAGGTA ATGGCGGTTG A
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Protein sequence | MRLERSIDLA AIALVLAFIL ADPAWASSGG GLPWEDPLQQ IQESITGPVA GFIALAAVAI AGGMLIFGGE LNDFARRLMY VVLVAGILLG ATQIVALFGA TGASIGIADH KLKARDGEEG RAGNGG
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