Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5422 |
Symbol | |
ID | 8016731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | - |
Start bp | 5870 |
End bp | 7927 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644827600 |
Product | histidine kinase |
Protein accession | YP_002978800 |
Protein GI | 241518172 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0504919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAATAAAC TTCGACCAAG TCTGCTTTTG TTGCTATGCG CGACGATCCC GGTTCTCGTC GTCGGTGTCG TCATCGGAGA ATATTTCCTA AGACAGCAGC GCGCGGCGAT TGACCGCGAT ATCGCCCAAC GCGCAGATTT TTCCGCCACC GGGTTGGCGC GTGCGCTTGA GATGCAACGT CAGTTGTTGT CGGTGGTTTC GGAATCGCCC CGATTGGACC CGCCGCTTGA AAGGAAGGCT TTCAAGGAGA TCGCCCATCG CTTGCTGGGC CGAATACCGG TCTGGCAAAT GCTGCATATC AGCGACCTTC ACGGCAACAT TGTGCTCTCG GTACCCACGC CCGAGGATGG CGCGTCGCAT TCGACGGTGA ATGATATGGA AAGTTATCGA CGAGTCATTG AATCGCGTAC TGCCGTCGTT GGCAGCGTCG TGCGGAGAGA ACGGGAAATA CCGACTTTCC CGATCCGTGT GCCAGTCGAG CGAGACGGAA CGATTACCTC TATCCTTACT GCATTGATCC GACCCGAAGA GATTACCAAT ATTCTCTACG CTAATGGATT GGCGAAAACG TGGACGGCTT GGATCGCCGA CGGCGACGGA AGGCTTGTGG CAGCAACGGG CGCCGCCCCC GCCCTGATCG GGGGTCCTTT GAATGCATTT GTTCGCGACA CGGGGTCAGA AGGGTCAGGC ATTGCGGGGG TGAAGATTGT TAGCGGAGAG GATGTCCGAA CAAGCTCCGC TTCAATCGAA GGCTCGAATT GGACCGTCCA CGTTGGGATG CCTCTGGCGG AATATCAGGA GATCGGCCGG ACTGAATATC GGATCTTGCT GGCCACAATC TTCCTGATTG TAGGCCTTCT CGTCGCAGCA GCGTTCTTGT TTCAACGTGA ATTGGCCGCC CGTCGCCGGC AGGATCTCGC CCTTGCCAGT GGGCAGCGAA TGGAAGCGCT TGGGAAATTA ACCGGAGGTG TGGCACATGA TTTCAATAAC CTCTTAATGA TTTTCCAGGC GGGGATTGAA GGAGTCCGAC GTCGCAAAAA CGACGAGCAA AAGCTAAATG TGACCCTCGA TATGATGTCA GAGGGAGTGT CCAAGGGAAA GGCGATCACG CACCGGCTCC TTTCCTTTTC CCGGCGCTCC AATCTCGATG CGGAAACATT TTTTATTCAA GACAAGATCG GTCCGCTGGA ACATTTGGTA AAGCAGGCCG CAACGGACCA GATCATTGTA GACACCGAGG TCGATCCAGA TATGTGGCCG GTCACTGTAG ACCCCCAGGG ATTCGAGGTG GCAATCATCA ATTTGGTGAC CAATGCCCGT GAAGCCATGC CTGACGGGGG TCGACTTCGT ATCCATGGAC GCAACATAAG TGAGGGTTCC AGAGAAATAA AACAGCTTCG CGGTCCCTGC GTTGCAATTT CCATATCCGA TAACGGTCCA GGAATACCGC AGGCAGACAT TCACCGGGTC TTTGAACCCT TCTTTACTAC AAAAGGCGGT CGGTCATCCG GTCTGGGGCT TAGTCAGGTC TACGGATTTG CTCAGCGATC AGGTGGAGCC GTTGTCGCAA GCAGCTTACC GGATCAAGGT GCTTCCTTTG TCATCTACCT TCCGAAGGCG GCTGGTCAAG TCGCTCCGTC AAGCTCAGCG ACCGTAGCCA ATCCTTTGCC GCGTAAGGTT CTCGTTGTAG ACGATACGCC GTCTTCACTC GAAGCCTCGA AGATGCTCCT CGAAATGGAG GGGATCACCG TTGCTACCGC GCCAAGCGGT CAGGAGGCCT TGACCGTGCT GGCGTCGGAG CCGAATGTCG AGCTGGTTTT GAGCGACATC ATGATGCCGA ACATGTCTGG GCTCGAACTG GCGATGGAGG TTCAAAGTCG TTATCCCAAC ACGTCAATCA TATTGATGAC CGGGTACAGC GATGCCCTTG AACAAGGTGC CAGAACACAG TTCCCAGTTC TTTCGAAACC ATTCAGCAGA GCAGGCATGC TCGGGGCTTT CGCGGCAGCG GCGTCGCAAA GAAATTCTGC ATCGGTGGTA AGGCTGCATC CCGGTTAG
|
Protein sequence | MNKLRPSLLL LLCATIPVLV VGVVIGEYFL RQQRAAIDRD IAQRADFSAT GLARALEMQR QLLSVVSESP RLDPPLERKA FKEIAHRLLG RIPVWQMLHI SDLHGNIVLS VPTPEDGASH STVNDMESYR RVIESRTAVV GSVVRREREI PTFPIRVPVE RDGTITSILT ALIRPEEITN ILYANGLAKT WTAWIADGDG RLVAATGAAP ALIGGPLNAF VRDTGSEGSG IAGVKIVSGE DVRTSSASIE GSNWTVHVGM PLAEYQEIGR TEYRILLATI FLIVGLLVAA AFLFQRELAA RRRQDLALAS GQRMEALGKL TGGVAHDFNN LLMIFQAGIE GVRRRKNDEQ KLNVTLDMMS EGVSKGKAIT HRLLSFSRRS NLDAETFFIQ DKIGPLEHLV KQAATDQIIV DTEVDPDMWP VTVDPQGFEV AIINLVTNAR EAMPDGGRLR IHGRNISEGS REIKQLRGPC VAISISDNGP GIPQADIHRV FEPFFTTKGG RSSGLGLSQV YGFAQRSGGA VVASSLPDQG ASFVIYLPKA AGQVAPSSSA TVANPLPRKV LVVDDTPSSL EASKMLLEME GITVATAPSG QEALTVLASE PNVELVLSDI MMPNMSGLEL AMEVQSRYPN TSIILMTGYS DALEQGARTQ FPVLSKPFSR AGMLGAFAAA ASQRNSASVV RLHPG
|
| |