Gene Rleg_5401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5401 
Symbol 
ID8007359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp816896 
End bp817867 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content62% 
IMG OID644822305 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002973565 
Protein GI241113730 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTTC TCGAAGTCAA GGACTTGCAG GTCAGTTTCG ATACGGCAGC CGGCCGCATC 
CTGGCGCTCA ACGGCGTCTC CTTCTCGCTC GAGCGTGGAG AGGTTCTGGC GCTGCTCGGC
GAAAGCGGCT CCGGCAAGTC GGTGACCGCA TCGGCCATCA TGGATCTCGT TCCCAACCCG
CCGGGCGAAA TCAATCAAGG ATCGATCTGC TTCGACGGTG TCGAGCTGTT GCAGCTCTCG
CGAAACGAGC GGCGCGATCT CTGCGGCGAT CGGATCGCCC TGATCTTTCA GGATGCGCTC
GCGGCGCTCA ACCCGGTCTA TTCCGTGGGT TGGCAGATCG CCGAAATGTT CCACATCCAC
GGCCGTACTC CGGAAGGTGG TGTCGAAAAA GCCGTGATCG ACCTTTTGAC GGCCATCGGC
ATTCCCGACC CTGAAAGCCG CGCCAGACAA TATCCGCATG AGTTTTCGGG CGGCATGCGC
CAACGCATCA TGATCGCCAT GGCCGTGGCA CTGGAACCGG ATGTCATCAT CGCAGACGAG
CCGACGACGG CGCTCGACGT GACGATCCAG GCGCAGGTGG TTGATCTTCT GGAGACTATC
CGCAAACGCA GCGATGCCGG CATGATCTTC ATTACCCATG ATCTCGGCGT CGTCGCCGAA
CTCGCCGATC GCGTTGCCGT CATGTATGCC GGCCGCGTCG TCGAAACCGC AAGCGTCTTC
GAATTGTTCG AAGATGCCCG CCATCCCTAC AGCGTCGGAT TGCTTGCCTC GCAGCCGCGC
ATGGACACGG ATGAAGACGA ATTGGTGCCG ATCCCCGGCT CCGCCCCCAA TCCTGTCGCC
CTGCCTTCCG GCTGCGCATT CAGAACGCGC TGTCCACGCG CCCAAGGGCT CTGTGCCGAG
GTCGTCCCCT CTCTTGAAAC CGTAGGGCCG GGCCGCCAGG CCGCCTGCCA CTTCCCGGTA
TCACCAGTAT GA
 
Protein sequence
MALLEVKDLQ VSFDTAAGRI LALNGVSFSL ERGEVLALLG ESGSGKSVTA SAIMDLVPNP 
PGEINQGSIC FDGVELLQLS RNERRDLCGD RIALIFQDAL AALNPVYSVG WQIAEMFHIH
GRTPEGGVEK AVIDLLTAIG IPDPESRARQ YPHEFSGGMR QRIMIAMAVA LEPDVIIADE
PTTALDVTIQ AQVVDLLETI RKRSDAGMIF ITHDLGVVAE LADRVAVMYA GRVVETASVF
ELFEDARHPY SVGLLASQPR MDTDEDELVP IPGSAPNPVA LPSGCAFRTR CPRAQGLCAE
VVPSLETVGP GRQAACHFPV SPV