Gene Rleg_5400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5400 
Symbol 
ID8007358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp815979 
End bp816896 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content64% 
IMG OID644822304 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002973564 
Protein GI241113729 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA CCTCCGCCGA CGTCCTCCCT GCCCGCGAGC GCCGAAGCCG CCGCATCTTG 
TGGTTCATGC GTGCGCTCGC GGGTGACCCT ATGGCGGTCG CCGCGACAAT CTGGCTGCTG
ATCGTCGTCC TTGCCATTCT TGCGGATGCA TCGTCGCTGC TGGGCGAAAA CCGCATTTCG
CTAAAGGCGC GCAACCTGCC GCCCTTCGAC TTCGGCCAGT CCTGGACGTT GTGGCTGGGC
GCCGACGCTC TCGGGCGTCC GCTCCTCGTT CGCCTCATTC AGGCGGCATC GACGACGATC
GGCATAGCGC TGGTGACCGT TCTGACGAGC CTGATCGGCG GAACGCTGCT CGGCGTGATC
GCCGGTTACT TCGGTGGCAT CATCGGCAAC CTTGTCATGC GGATCTGCGA CATCATTCTG
GGTTTCCCGA CGCTGCTGGT GGCGCTCTTC GGGCTCTACC TGTTCGGCCC GAGCGTCGGT
AACCTCATCA TCGTGCTCGC CGTTACCCGC ATGCCGGCCT ATATCCGCGT CGCAAGAGCT
GAAACTCTGG AGGTGCGGGA GAGGCTTTTC GTTGATGCGG CGCGCGCCTT CGGCGGCGGG
GCTGTCTGGA TATTGCGCAA TCACATTCTC CCAAGCGTCG CTCCCACGAT GCTGACGCTC
GCCTCGGTCA ATCTCGCCAT GGTCATGCTG TTCGAATCCG GGCTGAGCTA TCTCGGCCTC
GGCATCCAGC CGCCGGCCGT GAGCTGGGGC CTGATGGTGG CGCAGGGCCA GGGATATCTG
TCATCCGCCT GGTGGCTGGG CTTTTTTCCC GGTCTGGCTG TGATGCTCAC GACCATGTCC
TTCAATCTCC TCGCCAACTG GTTCCGGATC GTCAATGACC CGTCGCAGCA CTGGCGACTT
GTCAGCCGGA GGCGCTGA
 
Protein sequence
MTSTSADVLP ARERRSRRIL WFMRALAGDP MAVAATIWLL IVVLAILADA SSLLGENRIS 
LKARNLPPFD FGQSWTLWLG ADALGRPLLV RLIQAASTTI GIALVTVLTS LIGGTLLGVI
AGYFGGIIGN LVMRICDIIL GFPTLLVALF GLYLFGPSVG NLIIVLAVTR MPAYIRVARA
ETLEVRERLF VDAARAFGGG AVWILRNHIL PSVAPTMLTL ASVNLAMVML FESGLSYLGL
GIQPPAVSWG LMVAQGQGYL SSAWWLGFFP GLAVMLTTMS FNLLANWFRI VNDPSQHWRL
VSRRR