| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5367 |
|---|
| Symbol | |
|---|
| ID | 8007325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 776777 |
|---|
| End bp | 777571 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644822271 |
|---|
| Product | transcriptional regulator, DeoR family |
|---|
| Protein accession | YP_002973531 |
|---|
| Protein GI | 241113696 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.35499 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCCAGG CAGTTGGAGT GAAGGTCGAT CGACTGGATG CCATTCGCAG CCACCTCTAC
GCGAACGGCT TTTCGACCAT TCAGGCGCTT GCCGATGCGA TCGGAGCATC GCTTGCCACC
GTTCGTAGAG ACCTGCAGAT CCTTGAGCAG GAGGGCGCCA TTGATCGCGT GCATGGTGGA
GCGCGCATTG CCGAAGGATC GTCGGTTGAG GTTGCATTTC AGGAGCGGGA AAAGCGCCAT
TTATCGGCGA AGCGGGCGAT TGCCACCGCC GCCTACGACC TGCTTCATCC GCGTACGGCG
ATCTTTCTCG ACGCGGGAAC CACCGTCCTG CAGCTTGCGC GCCTCGTTCG CATCAACCCC
ATGCCGCTCA GGATATTCAC CAACGGCCTG ACGGTAGCGC AGGAATTCCT GAATATTCCG
AATTTGGAAG TGGTGCTTCT CGGCGGTCAG CTCCGCAGCG AGAATGCGTC GCTTGTCGGA
CCTCAGGCGG AGGCAATGCT GGAAACTTTA TGGTTCGACC AGCTCTTTCT TGGCGCCAGC
GCCATTAGTT CTGACGGCTC GATCTACAGC GTGGACAGTG CGGAAGCGAG CCTCAACCGG
CGCATGTTGG CTCGGTCGGC CAATCGTTTC GTCCTGGCCG ATTCCTCGAA ATTCGGAACC
ACGGCGACCT ACAAGGTCGC GCCGCTGGAC ACCGCGAAAG TCATTACCGA TTCCGGGCTT
TCGCGGCATT GGCGTGACGA GCTTGTCAAC TTCGGCGTCG ACGCAACGAT CGCCGATCTG
AGGGCGAGAG AGTGA
|
|---|
| Protein sequence | MSQAVGVKVD RLDAIRSHLY ANGFSTIQAL ADAIGASLAT VRRDLQILEQ EGAIDRVHGG
ARIAEGSSVE VAFQEREKRH LSAKRAIATA AYDLLHPRTA IFLDAGTTVL QLARLVRINP
MPLRIFTNGL TVAQEFLNIP NLEVVLLGGQ LRSENASLVG PQAEAMLETL WFDQLFLGAS
AISSDGSIYS VDSAEASLNR RMLARSANRF VLADSSKFGT TATYKVAPLD TAKVITDSGL
SRHWRDELVN FGVDATIADL RARE
|
|---|
| |