Gene Rleg_5338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5338 
Symbol 
ID8007296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp743730 
End bp744797 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content61% 
IMG OID644822242 
ProductABC transporter related 
Protein accessionYP_002973502 
Protein GI241113667 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.708738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0411085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCG TTCAATTCGC GGATGTGCGG AAATCATTCG GGACATTTCC GGTCATCAAA 
GGCGTGGATA TCGACATTGC CGACGGGGAG TTCGTGATCC TGGTCGGCCC GTCGGGTTGT
GGAAAATCCA CTCTTCTGCG GATGCTGGCG GGACTTGAGA ATATTTCCGG CGGCGAGATC
AAGATCGGCG GGCGCGTGGT CAACACGCTG CCGCCCAAGG ACCGTGACAT CGCCATGGTG
TTCCAGAACT ATGCGCTCTA TCCGCATATG ACGGTACAGG AGAACATGGG TTTCTCGCTG
ATGCTGAACA AGGCACCGAA GGCGGAAGCC GAGAAGCGGG TGAAATATGC CGCCGGCATC
CTCGGTCTCG ACAAATTGCT CGACCGTTAT CCGCGCCAGC TTTCCGGCGG TCAGCGCCAG
CGTGTCGCCA TGGGGCGGGC GATCGTCCGC GATCCGGAAG TCTTTCTGTT CGACGAACCG
CTATCCAACC TCGATGCGAA GCTGCGCGTC GCCATGCGCG CCGAAATCAA GGAACTGCAC
CAGCGGCTGA AAACGACGAC GGTCTATGTC ACCCACGACC AGATCGAGGC CATGACCATG
GCCGACAAGA TCGTCGTCAT GCATGACGGC GTCGTCGAGC AGATCGGCAC ACCGCTCGAG
CTCTACGACA AGCCGGCCAA TCTCTTCGTT GGCGGGTTTA TCGGCTCGCC GGCGATGAAC
ATGATCAAGG GCAGGCTCGA ACCCGAAAAC CCGACAAGTT TCAGGGCATC CGACGGCACT
GCGCTCCCGG TCGCCAATCC GCCAGCCGAC GCCATCGGCC GCGACCTCGT CTACGGGCTG
CGCCCGGAAT ACATTTTACT CGATGCCAAC GGGTTGCCCG GCGAAATCGT GGTGATCGAG
CCGACCGGCT ACGAGACGCA TCTTATCCTC AGGCTCGGCG GCAGCGACCT CAGCTGCGTC
TTCCGCGAAC GCGTCAGCGC GCGGCCGGGC GAAACCCTGC GCGTTTCTAT CGACGCCGCG
CATGTTCATC TCTTCGACAC CGAAACCGGG CGGAGATTGA CAGACTGA
 
Protein sequence
MAGVQFADVR KSFGTFPVIK GVDIDIADGE FVILVGPSGC GKSTLLRMLA GLENISGGEI 
KIGGRVVNTL PPKDRDIAMV FQNYALYPHM TVQENMGFSL MLNKAPKAEA EKRVKYAAGI
LGLDKLLDRY PRQLSGGQRQ RVAMGRAIVR DPEVFLFDEP LSNLDAKLRV AMRAEIKELH
QRLKTTTVYV THDQIEAMTM ADKIVVMHDG VVEQIGTPLE LYDKPANLFV GGFIGSPAMN
MIKGRLEPEN PTSFRASDGT ALPVANPPAD AIGRDLVYGL RPEYILLDAN GLPGEIVVIE
PTGYETHLIL RLGGSDLSCV FRERVSARPG ETLRVSIDAA HVHLFDTETG RRLTD