| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5180 |
|---|
| Symbol | |
|---|
| ID | 8007076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 587282 |
|---|
| End bp | 588403 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644822090 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002973350 |
|---|
| Protein GI | 241113515 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.652162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.275677 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGACA TCACCGTTAC AAACATTCCC CCGGATCGCG CCGCCGTTGC ATCGCAGTGG
CAGCTCATCT GGTGGGCTTT CCGCCGGCAC CGGCTGGCCA TGGTGGCGCT TGTCGTCACT
GTGCTGATGT ATATCGTTGC CCTGCTTCCC GGCTTCTTCG CCATCAACGA CCCGTACCTG
CAAAATGCGC GGGCGACCTT TCACCCGCCG CAGAAATTGC ATCTGATCGA TACTGAGAAC
GGGTTCTCGT TCGGCCTGCA TTATTATCCG ATGAAGCTGG CCCGCGATCC GGAAACGCTG
GCCGCCATCT ACAAGGAAGA CACGACAAAA CGTGTCGACG TCCAGTTTTT CGGGCGCGGC
TATGAATATT CGGTGTTCGG CCTGTTCAGG ACCAACATCC ATTTGATCGC CTCGCCCGAC
AAGACGACGC CGCTGCTTCT GTTCGGCGCC GACAGGCTTG GGCGCGATGT TTTCAGCCGA
ACGGTGCAGG GTTCGCAGAT CTCGTTGTCG ATCGGCCTCG TCGGCGTCTT CTTCTCGTTG
ATGCTCGGCA TCGTGCTCGG CGGCATCTCG GGATATTACG GCGGCCGCAT CGATTTCTTC
CTGCAGCGGG TGATCGATTT CGTGCTGTCG CTGCCGACGA TCCCGATCTG GCTGGCGATG
GCCGCAGCCC TGCCGCAGGA CTGGCCTGCG ACGCTACAAT ATATGATGAT CACGATCATC
CTGTCGCTGA CCGGCTGGGC GCAGCTCGCC CGCGTCGTGC GCGGCCGCTT CCTGTCCTTG
CGCACCGAGG AATTTGTCGC CGCCGCCAGG CTCGACGGCG TTCGCGAAAG ACGCATCATC
TTTCGCCACA TGCTGCCAAG CTTTGCCAGC CATATCATCG CGTCGATCAC GCTTGCGGTG
CCGGCAATGA TTCTTGCCGA AACCTCTCTC TCCTTCCTGG GGCTCGGTCT GCAGCCGCCG
ACCATCTCCT GGGGCGTGCT TCTGCGCGAG GCCCAGAACA TTCGCTCGAT CGCCACCGCG
CCATGGCTCT TCATGCCGGG CTGTGCCGTC GTGGTCGCCG TGATGGCGCT CAACCTTCTC
GGCGACGGCC TGCGCGATGC GGCCGACCCC TACAACAAAT GA
|
|---|
| Protein sequence | MADITVTNIP PDRAAVASQW QLIWWAFRRH RLAMVALVVT VLMYIVALLP GFFAINDPYL
QNARATFHPP QKLHLIDTEN GFSFGLHYYP MKLARDPETL AAIYKEDTTK RVDVQFFGRG
YEYSVFGLFR TNIHLIASPD KTTPLLLFGA DRLGRDVFSR TVQGSQISLS IGLVGVFFSL
MLGIVLGGIS GYYGGRIDFF LQRVIDFVLS LPTIPIWLAM AAALPQDWPA TLQYMMITII
LSLTGWAQLA RVVRGRFLSL RTEEFVAAAR LDGVRERRII FRHMLPSFAS HIIASITLAV
PAMILAETSL SFLGLGLQPP TISWGVLLRE AQNIRSIATA PWLFMPGCAV VVAVMALNLL
GDGLRDAADP YNK
|
|---|
| |