Gene Rleg_5154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5154 
Symbol 
ID8007050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp556675 
End bp557703 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content59% 
IMG OID644822064 
Productputative ABC transporter periplasmic sugar-binding protein 
Protein accessionYP_002973324 
Protein GI241113489 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0997977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.778027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCAAAT TTCTAAGCAC GACCGCATTG GCGGTCCTTG CATCGACGCT TTTCGCCGGC 
GCGGCCAATG CGGACGCGGA AAATCCGTTC CGCTGCAAGC CCGGTGAAAA ATACGTCATG
AACGTCATGG TATCGGGCGT CGAATATTGG TTCCCGGTCT ATGAAATGTT CAAGCAGGCC
GGTCAGCAGC TCGGTTGCGA GACCGCCTAT ACCGGCACGC CGGAATATGA CGTCAACAAG
CAGATCGCCA CTTTCGACCA GGCGCTGGCC CAGAACCCGG CCGGTATTCT CGTTCACCCG
ATGAACTCCG ACCCGTTCAT CGAGCCGATC AACCGGGCGA TCGACCAGGG CACGGCGGTC
GTGACATTCG CAGCCGATGC GCCGCTTTCC AAGCGCATCT CGTTCGTCAC GTCGGACAAT
ACCCGCGAAG GCACCTATGC GGCCGACGCG ATTGCCGAAA AGATGGGTGG CAAGGGTGAG
TATGCCGTTC TCGAAAATCC GGGCCAGGAC AACCACGACA AGCGTATCGC CGCCTTCATC
GCCCGTATGG AGGAAAAATA TCCTGATATG AAGCTGGTCG GCCGCGCTGC GTCCAACCAG
GACCCGAACA AAGCCTATCA GGGTCTGATG AGCTTGGTGC AGGCACATCC GAACATTGGC
GCCGTCTTCA TGCCGGAAGC GAATTCGGCC ATCGGCGCTT CGCAGGCCAA TAAGGAAAGC
GGCGGCAAGA TCCTCGTGAT GTGCGCCGAC GTCAACGCCA ACATTCTCGA CATGATCAAG
GCGGGCGAAG TGTTCGGCTC GATCAACCCG AACCAGGGCA TGCAGGGTTA CATGGGCTTC
ATGCTCCTGT GGCTTGCCAA GCATCCCGAA CTCATCGACC CGATGAACGA CGCCAAGCGC
GTCGGCTTCA ATCCGATGAG CATTCCGTTC GTCGACAACG GCTTGTCGAT CGTCACGGCT
GCCAATGCCG ACGATTTCTA CTGGGACAAG TATCTGAAGC GGCGGGGCAC CAAAGGCATC
GAGGAGTAA
 
Protein sequence
MRKFLSTTAL AVLASTLFAG AANADAENPF RCKPGEKYVM NVMVSGVEYW FPVYEMFKQA 
GQQLGCETAY TGTPEYDVNK QIATFDQALA QNPAGILVHP MNSDPFIEPI NRAIDQGTAV
VTFAADAPLS KRISFVTSDN TREGTYAADA IAEKMGGKGE YAVLENPGQD NHDKRIAAFI
ARMEEKYPDM KLVGRAASNQ DPNKAYQGLM SLVQAHPNIG AVFMPEANSA IGASQANKES
GGKILVMCAD VNANILDMIK AGEVFGSINP NQGMQGYMGF MLLWLAKHPE LIDPMNDAKR
VGFNPMSIPF VDNGLSIVTA ANADDFYWDK YLKRRGTKGI EE