| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5151 |
|---|
| Symbol | |
|---|
| ID | 8007047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 553128 |
|---|
| End bp | 554045 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644822061 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_002973321 |
|---|
| Protein GI | 241113486 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00128195 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCCA AGACTGGCGT AGCCAATGCC GGAAACCTGA TCATGACTGG CGTCCTACTG
ATGCTGCTCG GCGATCTGCT TTTTGCGCTG AACGATGCAA TGGGCAAGTG GCTGGTCGCG
AGCTTTGCCG TCGGCCAGGT GCTGGTGATC CGCTCGGTCG GCGCCTTCAT CGTGCTCGGG
CCAATGATCC TGCGGCAAGG GCCGCTGGCC TTGTTCCGCG TGGAGCAGAA GGGCCTGCAG
TTCATCCGTG TTTTCATGGC GACCTGCGAT GTCGCCCTAT TCTACGCTGC CGTCGCCTAT
CTGCCGCTCG CAGACGTCAT GACCTTCTAT ATGGCTGGGC CGATCTACAT TGCGGCGCTC
TCGCATTTCT TTCTCGGAGA GAAGATCGGC TGGCGCCGGT GGCTCGCCGT TCTGATCGGC
TTTGCCGGCG TCGTCATCGC GCTACGTCCG TCCACGGCGA TGCTGTCGCT TCCATCGCTC
TTCGGCCTTG CCGGCAGCCT TGCCTTTGCG CTGTCGCTGG TGATGAGCCG TTATCTGCGC
TCGACCAGCG ACACGACGCT GGTAACATGG CAAACGATCG CCGCGCTCGT CACCGGCATC
GCCTTGAGCA TCAGTCACTG GCAGCCGGCA ACGCTCATCG ATTGGTCCGG CATGCTGCTG
CTCGGCATCG TTGCCACCTG CGCGCATCTA CTTATCACCC GCTCGCTAAA GCTCGCACCA
GCATCGCTGC TCGCGCCGCT GCAATATACG CTGCTGCTCT GGGCGATCAT CCTCGGCTAC
CTGTTCTTCA ACGATGTTCC CGATACGCAG ATCATCGTCG GGGCCGCAAT CATCGTCGTT
GCGGGGCTCT TCATCTTCCA CCGGAAGAAT TTGAAAGAGA CGGTTCCGAC CGAAGCCGTC
CCGCCCGACG GCCATTGA
|
|---|
| Protein sequence | MTPKTGVANA GNLIMTGVLL MLLGDLLFAL NDAMGKWLVA SFAVGQVLVI RSVGAFIVLG
PMILRQGPLA LFRVEQKGLQ FIRVFMATCD VALFYAAVAY LPLADVMTFY MAGPIYIAAL
SHFFLGEKIG WRRWLAVLIG FAGVVIALRP STAMLSLPSL FGLAGSLAFA LSLVMSRYLR
STSDTTLVTW QTIAALVTGI ALSISHWQPA TLIDWSGMLL LGIVATCAHL LITRSLKLAP
ASLLAPLQYT LLLWAIILGY LFFNDVPDTQ IIVGAAIIVV AGLFIFHRKN LKETVPTEAV
PPDGH
|
|---|
| |