Gene Rleg_5063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5063 
Symbol 
ID8007656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp445940 
End bp446953 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content60% 
IMG OID644821978 
Productputative ABC transporter, substrate-binding protein 
Protein accessionYP_002973238 
Protein GI241113403 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCTT CACGCAGCCT TTTTCACACC GTCGCTTTTT CGACGCTTCT CGCCGCAGCA 
TCTTTCACGA CCAGCGCCGC ACATGCGACC GACAAGATCA CCATCATGGT CGGCGGTTAT
GAGAAGCAGA TCTATCTGCC CGCCAAGCTT GCCGAATCGC TCGGATACTT CAAGGACGAG
GGTCTCGACG TGGAGCTGCT GAACGAAGCT GCCGGCGTCG ATGCCGAAAA CCAGCTTCTG
GCGGGCGCCG TCCAGGGTGT CGTCGGCTTC TACGACCATT GCGTGGATCT GCAGGCCAAA
GGCAAATTCG TCGAATCCAT CGTCCAGTTC AGCCAGGCGC CGGGCGAGGT CGAGATGGTC
TCGAGCAAGT ATCCTGACAT CAAGTCGCCG GCCGATTTCA AGGGCAAGAG CCTCGGCGTC
ACCGGTCTCG GCTCGTCCAC CAATTTCCTG ACCCTCTTCA TGGCCTCGAA GGCCGGCCTC
AAGCCCGGTG ATGTCGTGAC AATTCCAGTC GGCGCCGGCG GCACCTTCAT CGCCGCCATG
CAACAGGATC AGATCCAGGC CGGCATGACG ACCGAGCCGA CGATTTCGCG CATGATCAAG
ACCGGCGAGG CGAGCGTGCT CGTCGATATG CGCACGGTCG AGGCGACCCG TCAGGCGCTC
GGCGGCACCT ATCCGGCCGC CTCGCTCTAC CTGGAAACCT CCTGGGTCGA CGCGCACAAG
GAAGAGGCAC AGAAGCTCGC CAACGCCTTC GTCAAGACGC TGCGCTACAT CAACACGCAT
TCAGCCGCCG AGATCGCGGA CAAGATGCCG AAGGACTTCT ACGTCGGCGA CAAGGACGGC
TACATCAAGG CTCTCGACGA GGGCAAGGGC ATGTTCACAC CGGATGGCGT CATGCCGGAA
GACGGTCCGA AAACCGTGCT TGCCGTGCTC TCTGAGTTCT CCAAGAACGT CAAGGGCAAG
CAGATCGACC TTGCCAAGAC CTACACGACG GAATTCGTCA AGAACGTCAA GTAA
 
Protein sequence
MRSSRSLFHT VAFSTLLAAA SFTTSAAHAT DKITIMVGGY EKQIYLPAKL AESLGYFKDE 
GLDVELLNEA AGVDAENQLL AGAVQGVVGF YDHCVDLQAK GKFVESIVQF SQAPGEVEMV
SSKYPDIKSP ADFKGKSLGV TGLGSSTNFL TLFMASKAGL KPGDVVTIPV GAGGTFIAAM
QQDQIQAGMT TEPTISRMIK TGEASVLVDM RTVEATRQAL GGTYPAASLY LETSWVDAHK
EEAQKLANAF VKTLRYINTH SAAEIADKMP KDFYVGDKDG YIKALDEGKG MFTPDGVMPE
DGPKTVLAVL SEFSKNVKGK QIDLAKTYTT EFVKNVK