Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4588 |
Symbol | |
ID | 8015337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 4714088 |
End bp | 4714795 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644827165 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_002978365 |
Protein GI | 241207269 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.253572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCAC GCGAGCGGTT GATCGTCGGC CTGGATGTTC CAACGATCGG CGAGGCGGAA AGACTGGTTT CCACGCTCGG CGACGACATT CTCTTCTACA AGATCGGCTA TCAGCTGGTC TTTGCCGGCG GCCTGGAATT CGCCCGTGAT CTTGCCGCAA GCGGCAAGAA GATCTTTCTC GACATGAAGC TGCTCGACAT CGACAACACT GTCGCCTCCG GCGTCGAGAA CATCGCCAAG ATGGGCATGT CGATGCTGAC GCTGCATGCC TATCCGAAAG CCATGAAGGC AGCGGTCGAG GCCGCAGCCG GCTCCGGCCT CTGCCTGCTC GGCGTGACCG TGCTGACCTC GATGGATGCC GACGACCTTG CCGAGGCGGG CTACAGCCAG GATCCGCACA GCCTGGTGCT GCGCCGCGCC GAACAGGCGC GCGCAGCCGG CATGGGCGGT ATCGTCTGCT CGGCGGAAGA AGCGGCTGCA GTGCGCGAAA TCGTCGGACC CGACATGGCC ATCGTCACCC CCGGCATTCG CCCTGATGGT AGCGACAAGG GCGACCAGAA GCGGGTGATG ACGCCTTTCG ACGCGCTGAA GGCGGGAGCG ACGCATCTCG TTGTCGGCCG GCCTGTCGTC AAGGCTCCGG ATCCCCGCGA TGCCGCCCGC GCGATCCTCA GCGAGATGGT GAGCGCGCTC TGGCCGGCAA ATCGCTGA
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Protein sequence | MDARERLIVG LDVPTIGEAE RLVSTLGDDI LFYKIGYQLV FAGGLEFARD LAASGKKIFL DMKLLDIDNT VASGVENIAK MGMSMLTLHA YPKAMKAAVE AAAGSGLCLL GVTVLTSMDA DDLAEAGYSQ DPHSLVLRRA EQARAAGMGG IVCSAEEAAA VREIVGPDMA IVTPGIRPDG SDKGDQKRVM TPFDALKAGA THLVVGRPVV KAPDPRDAAR AILSEMVSAL WPANR
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