| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4324 |
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| Symbol | |
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| ID | 8015104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 4441647 |
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| End bp | 4442996 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644826900 |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_002978103 |
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| Protein GI | 241207007 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.111635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGGA AAAATCAGGA GACGGCCGGT CCGGTGCAGC TCGAATGGTA TAGCGACGTG
CCGCGCTCAA TCCGGATGCA CAGCATCGTC GGCCTGACGG TTCTCTTCAC CTCGTTCGGA
GGCTTCGGCT TCTGGGCGGC GACGGCGCCG CTCGCCTCCG CCGTTATCGC GCAGGGAAGC
TTCGTCGCGA CCGGCAACAA CAAGATCGTC CAGCATCTGG AAGGCGGCAT CATCAAGGAG
ATGCGCGTCA GCGAAGGCGA TACGGTCAAG GAAGGCGATA TCCTGCTGAC CCTCGATCCT
ACAGCATCCC GCTCAAACGA GCGGATGCTG CAGCTTCGCC GTCTGCGCCT GGAAGCCATT
GTCGCAAGGC TCCGTGCCGA AGCGCAGGGC CTGCGTGAAC TCCAGCTTCC CAATATCGTG
ACGAAGGAGG CCAGCGATAC CGATATCAAC GCGATCATCC AGAGCCAGAA CGTCGTCTTC
CACAGCAAGC AGATCAAGCT CGAAGAGCAG CTCAATCTGA TCGGGAAGAA CATCGCGTCG
CTGGAATTCC GGTTCGCCGG CTATAGGGGC CAGAGAGATT CCTTCGAAAG GCAGCTGTCG
CTGCTGACCG AGGAACGCGA CTCCAAGGCT CGGCTGGTGA AGGTCGGCTA TATGCGCAGG
ACGGATCTGC TGGCAATCGA GCGGGCGATC GCCGATGCGA TGGGCGACAT TGCTCGACTG
AACGGCGAGC TCAACGAGAG CGAGGCCGAG ATCGCCAAAT TCCGCCAGGA AGCCGTCATC
GCCGTCAACT CCAACAAGCA GGCGGCACTC GATGCACTCG AGACCGCCGA AACCGATCTG
GACAGTGTGC GCGAACAGAT GCGCGAGGCC GCCGGCGTGC TCGAACGGAC CACTATCCGT
TCGCCGGTGT CGGGCACGGT GGTGCGCTCC TATTTTCACA CAGCCGGCGG TGTCATCACG
ACAGGAAAGC CGATCATGGA AATCCTGCCG TCGCACGTGC CGCTGATCCT GGAAGCGCAG
GTATTGCGCA CCTCGATCGA CCAGTTGCAT GAGGGAGAAA CGGCCTCCAT CCGCCTCACG
GCGCTCAACC GGCGCACGAC CCCTGTTCTG CAGGGCAAGG TCTTCTACGT CTCGGCCGAT
TCGATCGAGG AAAATTCGGG AGCTTCGGTC AAGGACGTCT ATATCGTCCG CGTCGGCATA
CCCGATTCCG AGATTGCGCG GGTGCACAAT TTCCATCCCG TTCCCGGCAT GCCGGCCGAA
GTGCTGATTC AGACATCGGA ACGCACCTTC TTCGAATATC TGAGCAAACC GATCACCGAC
AGCATGTCCC GGGCATTCAA GGAGCGCTGA
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| Protein sequence | MGRKNQETAG PVQLEWYSDV PRSIRMHSIV GLTVLFTSFG GFGFWAATAP LASAVIAQGS
FVATGNNKIV QHLEGGIIKE MRVSEGDTVK EGDILLTLDP TASRSNERML QLRRLRLEAI
VARLRAEAQG LRELQLPNIV TKEASDTDIN AIIQSQNVVF HSKQIKLEEQ LNLIGKNIAS
LEFRFAGYRG QRDSFERQLS LLTEERDSKA RLVKVGYMRR TDLLAIERAI ADAMGDIARL
NGELNESEAE IAKFRQEAVI AVNSNKQAAL DALETAETDL DSVREQMREA AGVLERTTIR
SPVSGTVVRS YFHTAGGVIT TGKPIMEILP SHVPLILEAQ VLRTSIDQLH EGETASIRLT
ALNRRTTPVL QGKVFYVSAD SIEENSGASV KDVYIVRVGI PDSEIARVHN FHPVPGMPAE
VLIQTSERTF FEYLSKPITD SMSRAFKER
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