Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4290 |
Symbol | |
ID | 8015068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 4397231 |
End bp | 4399816 |
Gene Length | 2586 bp |
Protein Length | 861 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644826860 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_002978069 |
Protein GI | 241206973 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.731111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.889005 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGAAA TAAAAAGCAG CCTGCCCGGT CAGGCGGATG ATGGCGCACG CGCCCATCGC CGTCCGCTGA TGGCAGGTCA AGGATATAAA TCTGCAACGG CACACGAGGC CGCAAAGCAA GAGCACGGAC CATTGGCGCG CTTCCTGAAA AGCTGCGCGG CCGGCACGGC GCTTGCCGCG CTGGCGCGGC CGGCCCTGGC ACAGGCGGAG CAGCAGGCGG CGGCGACGGC TCACCTCTTC ACATCCTCGC AAGTGATCGG TGTTTCCGTC GTCATCGGCG TCATATCGGC AGCACTGCTG TCGACGCTGT GGCTCGTGCG TCAGCGCGGC AACCTGGAAA ACGAGAGCCG GGAAATCCGC TCGGCGCTCT CCGATGCCCA GCAGCGCATT TCGCAATACC AGGCTCTGAT CGCCGACAAG AACCGGCGGA TCGTCATCTG GGACGGCAAT GCGCGCCCCG AACTGCTCGG CCAGCTTCCG CCTGAGACCG GCGCGCCGCA GGACGGCGAA TTCCTGGCCT TCGGCCTGTG GCTGAAGTCA CGTTCGGCTT CCGAGCTGGA AAAGGCGATC GACCGGCTGC GCGACGAGGC ACAGAGCTTC GACATGGTGG TCGAAACCAT CCGCGACGAA ATCCTCGAGG CGCAGGGCCG GGTTTCCGGC GGGCGTGCCT TCGTGCGTTT CGTGGCGCTC AACAATCTGC GCGCCGAGCT CGCAGAACTC AGGATCGAGC GCGACCGGCT GATGACCTCG ATCTCCGCCT TCCAGACCAT GCTCGACGCG ATCGACATGC CGGCCTGGCA GCGCGATCCG GTGGGTCGCC TCACCTGGGT CAACCAGGCT TATGGCGAGG CGGTCGAAGC GCGATCGCCG CAGCAGGCGA TCAATGAAGG CCGCGAGATG CTGACGACCG TGGCGCGCGA ACGCATTCGC GCCACGACGA CGCCGGAGTC GCCCTTCCAC GACAAGATCT CGACGGTCGT GCACGGAAAC CGCACATTCT TCGACGTCGT CGACGTCAGG GTTCCCGGCG GCTCGGCCGG CATCGCGATC GATGTGTCCG ACATAGAGGC CGTGCGCGCC GAGCTGGAAC GGACGCTGAA GAGCCATGCC GAAACGCTCG ACCATCTCGC CACGCCTGTT GCCATCTTCG ATGGCGAGCG CCGGCTGCAA TTCTACAACC AGGCCTTCGT CGCGCTCTGG GAGCTGGATA TCGCCTTCCT CGAAGGCCGG CCCGACAATA GTGAGCTGCT CGAGCGGCTG CGGGCGGCCA AGAAACTGCC GGACCAGCTC AACTGGAAAA GCTGGAAGGA AGCCGCACTT TCCGTCTATC GCGCGCTCGA CACGCAAACC GATCTCTGGC ATCTGCCGAA CGGGCAAACG TTGCGCGTCT TTGCGACCGC CCATCCGCAG GGCGGCGCCA CCTGGGTGTT CGAAAACCTG ACCGAACAGG TCGATCTTGA AACGCGCTAC AACACGCTGG TCAAGGTGCA GGGCGAAACG ATCGACCATC TTTCCGAAGG TGTGGCGGTG TTCGGTCCTG ATGGACGCAT CCGCCTTTCG AACCCGGCCT TCCGCGCGCT CTGGGGGATC ACCGAAACCG AAGCCAAGCC CGGCACCCAT ATTCGTGCGC TGGGCGAGGC CTGCGCCCCG TCCTATGACC AGCCGGACGG CTGGAAGACC TTCGCCGAAC TGATCACCAG CTTCGACGAC GAACGCCGCT CGGGCCAGGG AACGCTGGAA CTCTTCTCCG GCCTGGTGCT CGACTACGCC GTCATCCCGC TGCCGAACGC GCAGACCATG CTGACCTTCG TCAATATGAC GGACAGCGTG CGTGCCGAGC GCGCGCTGAC CGAGAAAAAC GAAGCGTTGC GCAAGGCCGA CGAGCTGAAG AACGACTTCG TCCAGCACGT TTCCTATGAA CTGCGTTCGC CACTGACCAA CATCATCGGC TTCACCGATC TCCTGCGCAC GCCGGGCGTC GGGCCGCTTA CCGAACGGCA GGCCGAATAT ATCGACCACA TTTCGACCTC GTCCTCGGTT CTGTTGACGC TCGTCAACGA TATTCTCGAC CTTGCGACCG TCGACGCCGG CATCATGCGC CTCAATTATG CGGATATCGA TCTCAACGAC CTGCTCGACG ACGTCTCGAT GCAGATCGCA GATCGCCTGC ACGAAAGCGG TGTCGCGCTT GAAATCACCG CACCCGCCTA TCTCGGCTCG ATCGTTGCCG ATCCGCAGCG GCTGAAGCAG ATCCTTCTGA AGCTTCTGTC CAATGCGGCG AATTTCTCGC CCGAAGGCAC CTCGATCTCG CTGGAATGCC ATCGCGAAGG CACGGATTTC GTCTTTTCCG TCGGCGATCG CGGCCCCGGC ATCTCACCTG ACATGATCGC GACCGTCTTC GACCGGTTTG CTACGGGAGC GAAAAGCGGC AAACGCGGCG GCGCCGGCCT CGGCCTCTCG ATCGTCGACA GCTTCGTCAG TCTGCATCAT GGCGATGTGA CGATCGACAG CGAGCCGGGC AAGGGCACGA CCGTCGTCTG CCGTATCCCC TCGGTCGATG TCCCGCATTC CGCCGCCGCC GAATGA
|
Protein sequence | MSEIKSSLPG QADDGARAHR RPLMAGQGYK SATAHEAAKQ EHGPLARFLK SCAAGTALAA LARPALAQAE QQAAATAHLF TSSQVIGVSV VIGVISAALL STLWLVRQRG NLENESREIR SALSDAQQRI SQYQALIADK NRRIVIWDGN ARPELLGQLP PETGAPQDGE FLAFGLWLKS RSASELEKAI DRLRDEAQSF DMVVETIRDE ILEAQGRVSG GRAFVRFVAL NNLRAELAEL RIERDRLMTS ISAFQTMLDA IDMPAWQRDP VGRLTWVNQA YGEAVEARSP QQAINEGREM LTTVARERIR ATTTPESPFH DKISTVVHGN RTFFDVVDVR VPGGSAGIAI DVSDIEAVRA ELERTLKSHA ETLDHLATPV AIFDGERRLQ FYNQAFVALW ELDIAFLEGR PDNSELLERL RAAKKLPDQL NWKSWKEAAL SVYRALDTQT DLWHLPNGQT LRVFATAHPQ GGATWVFENL TEQVDLETRY NTLVKVQGET IDHLSEGVAV FGPDGRIRLS NPAFRALWGI TETEAKPGTH IRALGEACAP SYDQPDGWKT FAELITSFDD ERRSGQGTLE LFSGLVLDYA VIPLPNAQTM LTFVNMTDSV RAERALTEKN EALRKADELK NDFVQHVSYE LRSPLTNIIG FTDLLRTPGV GPLTERQAEY IDHISTSSSV LLTLVNDILD LATVDAGIMR LNYADIDLND LLDDVSMQIA DRLHESGVAL EITAPAYLGS IVADPQRLKQ ILLKLLSNAA NFSPEGTSIS LECHREGTDF VFSVGDRGPG ISPDMIATVF DRFATGAKSG KRGGAGLGLS IVDSFVSLHH GDVTIDSEPG KGTTVVCRIP SVDVPHSAAA E
|
| |