| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4277 |
|---|
| Symbol | |
|---|
| ID | 8015055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 4379712 |
|---|
| End bp | 4380989 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644826847 |
|---|
| Product | polyhydroxyalkanoate depolymerase, intracellular |
|---|
| Protein accession | YP_002978056 |
|---|
| Protein GI | 241206960 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
|---|
| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTATC AGCTTTATGA ATTGAACCAT GCCGCCATGG CGCCGTTTCG CGCCGCGGCA
GATATCATGC GATTTGCCTA TGCCAATCCG CTGAATCCGT TCTCCCATAC GCCGTTCGGC
CGGACGATGG CGGCAAGTCT CGAAATGTTC GAACGCACGA CGCGCCGCTA TGGCAAGCCG
GAATTCGGAT TGAAGCAGAC GACGATCGGT GAAAAGACGG TTTCCGTCCG CGAAGAGGTT
GTCTGGTCGC GACCCTTCTG CAATCTTCTG CATTTCGCCC GCGGTATTCC AGCCGCCCGC
GGCAATGACC CACGCATCCT GATCGTCGCG CCGATGTCCG GCCACTATGC CACGCTGCTG
CGCGGCACGG TCGAGGCGCT GCTGCCGAGT GCCGATATCT ACATCACCGA CTGGATCGAC
GCTCGCATGG TGCCGATGAC GGAAGGCACG TTCGATTTCG ACGATTACGT CGACTACGTC
ATCGAGATGC TGCATTTCCT CGGTCAGGAC ACGCATGTCA TCGCCGTCTG TCAGCCTTCC
GTTCCGGTGC TGGCAGCCGC TGCCGTGATG GAGGAAGCCA GGGATCCGCT TTCGCCGGCG
TCGATGACGC TGATGGGCGG CCCGATCGAC ACGCGCATCA ACCCGACGGC GGTCAATAAG
CTCGCCCAGG AGCGGTCGCT GCAGTGGTTC TCCGACAACG TCATCATGAA CGTGCCCTGG
CCGCAGCCGG GCTTCATGCG CCCGGTCTAT CCGGGATTCC TGCAGCTTTC GGGCTTCATG
TCGATGAATC TTGATCGCCA CCTCGTGGCG CACAAGGAAT TCTTCATGCA TCTCGTGAAG
AACGACGGCG AGCCGGAAAG ACATCGCGAT TTCTACGATG AATATCTCGC TGTCATGGAT
CTGACCGCCG AATTCTATCT GCAGACGGTG GAGGAAGTCT TCATCAAGCA TTCGCTGCCG
AAGGGCGAAC TGATGCATCG CGGCAAACGC GTCGATCCGG CGGCAATTCG TAACGTGGCG
CTGCTGACCG TCGAAGGTGA GAATGACGAT ATCTCAGGTG TCGGCCAGAC AAAGGCGGCG
CAGACTATCT GCGTGAACAT TCCCGAAGAT ATGCGCATGC ACTATCTCCA GCCGGATGTC
GGCCATTATG GTGTTTTCAA CGGCTCGCGT TTCCGCCGCG AGATCGCGCC GCGCATCATC
GATTTCGTCC GAAAGCATTC CCGTTCCGCC GTCAAGCCTC CGATCCCGCG TGTCATCAAG
GGCGGCCGGA CGGGCTGA
|
|---|
| Protein sequence | MFYQLYELNH AAMAPFRAAA DIMRFAYANP LNPFSHTPFG RTMAASLEMF ERTTRRYGKP
EFGLKQTTIG EKTVSVREEV VWSRPFCNLL HFARGIPAAR GNDPRILIVA PMSGHYATLL
RGTVEALLPS ADIYITDWID ARMVPMTEGT FDFDDYVDYV IEMLHFLGQD THVIAVCQPS
VPVLAAAAVM EEARDPLSPA SMTLMGGPID TRINPTAVNK LAQERSLQWF SDNVIMNVPW
PQPGFMRPVY PGFLQLSGFM SMNLDRHLVA HKEFFMHLVK NDGEPERHRD FYDEYLAVMD
LTAEFYLQTV EEVFIKHSLP KGELMHRGKR VDPAAIRNVA LLTVEGENDD ISGVGQTKAA
QTICVNIPED MRMHYLQPDV GHYGVFNGSR FRREIAPRII DFVRKHSRSA VKPPIPRVIK
GGRTG
|
|---|
| |