Gene Rleg_4276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4276 
Symbol 
ID8015054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4378665 
End bp4379507 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content59% 
IMG OID644826846 
Product5-carboxymethyl-2-hydroxymuconate Delta-isomerase 
Protein accessionYP_002978055 
Protein GI241206959 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGA TGCGTGTTGG CGAAGCAGGC AGTGAAAAAC CAGCACTTCT CGATGCCGAT 
GGCAAGATCC GCGATCTCTC CGGTCATGTC GCCGATATCG GCGGTGAAGC GATCGGACCG
GCAGGCCTTG CAAAGATAGC GGCGATCGAT CCGAAGAGCC TTCCGGAAAT CGCACCCGGC
CGCATCGGCG CCTGCGTCGC GGGCACTGGC AAGTTCATCT GCATCGGCTT GAATTATTCG
GATCATGCTG CCGAAACCGG TGCGACCGTG CCGCCCGAGC CGATCATCTT CATGAAAGCG
ACATCCGCAA TCGTTGGACC GAACGACAAT GTCGTCATTC CCCGCGGTTC GGAAAAGACC
GATTGGGAAG TTGAGCTCGG CGTCGTCATC GGCAAAACCG CCAAATATGT GACGGAAGCC
GAAGCGCTGG ATTATGTCGC CGGTTATTGC GTCTCCAATG ACGTTTCCGA GCGCGCTTTC
CAGACCGAGC GGTCTGGTCA GTGGACCAAG GGCAAATCCT GCGACACCTT TGGCCCGATC
GGCCCCTGGC TCGTGACCAA GGACGAAATT GCCGAACCGC AGAACCTCGG CATGTGGCTG
ACGGTCAACG GCCAGAAGAT GCAGAACGGC TCGTCGAAAA CGATGGTTTA CGGGGTTGCG
TTTCTCGTCT CCTACCTCAG CCAGTTCATG TCGCTGCATC CCGGTGACGT GATCTCCACC
GGCACGCCTC CGGGCGTCGG CATGGGCCTC AAGCCGCCGC GTTATCTCAA GGCCGGCGAC
GTGGTCGAAC TCGGCATCGA AGGTCTCGGC ACGCAGAAGC AGACTTTCGT AGCGGATCGT
TAA
 
Protein sequence
MKLMRVGEAG SEKPALLDAD GKIRDLSGHV ADIGGEAIGP AGLAKIAAID PKSLPEIAPG 
RIGACVAGTG KFICIGLNYS DHAAETGATV PPEPIIFMKA TSAIVGPNDN VVIPRGSEKT
DWEVELGVVI GKTAKYVTEA EALDYVAGYC VSNDVSERAF QTERSGQWTK GKSCDTFGPI
GPWLVTKDEI AEPQNLGMWL TVNGQKMQNG SSKTMVYGVA FLVSYLSQFM SLHPGDVIST
GTPPGVGMGL KPPRYLKAGD VVELGIEGLG TQKQTFVADR