Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4276 |
Symbol | |
ID | 8015054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 4378665 |
End bp | 4379507 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644826846 |
Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
Protein accession | YP_002978055 |
Protein GI | 241206959 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGA TGCGTGTTGG CGAAGCAGGC AGTGAAAAAC CAGCACTTCT CGATGCCGAT GGCAAGATCC GCGATCTCTC CGGTCATGTC GCCGATATCG GCGGTGAAGC GATCGGACCG GCAGGCCTTG CAAAGATAGC GGCGATCGAT CCGAAGAGCC TTCCGGAAAT CGCACCCGGC CGCATCGGCG CCTGCGTCGC GGGCACTGGC AAGTTCATCT GCATCGGCTT GAATTATTCG GATCATGCTG CCGAAACCGG TGCGACCGTG CCGCCCGAGC CGATCATCTT CATGAAAGCG ACATCCGCAA TCGTTGGACC GAACGACAAT GTCGTCATTC CCCGCGGTTC GGAAAAGACC GATTGGGAAG TTGAGCTCGG CGTCGTCATC GGCAAAACCG CCAAATATGT GACGGAAGCC GAAGCGCTGG ATTATGTCGC CGGTTATTGC GTCTCCAATG ACGTTTCCGA GCGCGCTTTC CAGACCGAGC GGTCTGGTCA GTGGACCAAG GGCAAATCCT GCGACACCTT TGGCCCGATC GGCCCCTGGC TCGTGACCAA GGACGAAATT GCCGAACCGC AGAACCTCGG CATGTGGCTG ACGGTCAACG GCCAGAAGAT GCAGAACGGC TCGTCGAAAA CGATGGTTTA CGGGGTTGCG TTTCTCGTCT CCTACCTCAG CCAGTTCATG TCGCTGCATC CCGGTGACGT GATCTCCACC GGCACGCCTC CGGGCGTCGG CATGGGCCTC AAGCCGCCGC GTTATCTCAA GGCCGGCGAC GTGGTCGAAC TCGGCATCGA AGGTCTCGGC ACGCAGAAGC AGACTTTCGT AGCGGATCGT TAA
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Protein sequence | MKLMRVGEAG SEKPALLDAD GKIRDLSGHV ADIGGEAIGP AGLAKIAAID PKSLPEIAPG RIGACVAGTG KFICIGLNYS DHAAETGATV PPEPIIFMKA TSAIVGPNDN VVIPRGSEKT DWEVELGVVI GKTAKYVTEA EALDYVAGYC VSNDVSERAF QTERSGQWTK GKSCDTFGPI GPWLVTKDEI AEPQNLGMWL TVNGQKMQNG SSKTMVYGVA FLVSYLSQFM SLHPGDVIST GTPPGVGMGL KPPRYLKAGD VVELGIEGLG TQKQTFVADR
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