Gene Rleg_3950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3950 
Symbol 
ID8014765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4024294 
End bp4025298 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content61% 
IMG OID644826519 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002977730 
Protein GI241206634 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCT TTCTGATCTA TGCGGCAAAA CGCTTTCTGC AATTTCTCTT CGTGGTCTTC 
ACCGGCATCA CGCTGGCCTT CCTGATCGCG CATTTTTCGC CGGTCGATCC GATCGAGCAG
ACCGTATCGC TGTTGACGAG CTTCGGTTCC ACCGATCCGC AGGCCGTCGA AATCCTCCGC
GAATCGCTGC GCGAGCTCTA CGGCACCGGC GGCCCGCTGC TGGAGCAGTA TTTCACCTTC
TGGGGCCGTG TCCTGACCGG CGATTTCGGC CCGTCGCTTT CGTCTTTCCC GACTCCGGTG
ATGACCGTTA TCGGCCGGGC ACTGCCCTGG ACCGTCGGGC TTCTGACGCT CGCAACGATC
ATTTCCTGGA TCATCGGCAA TTTTCTCGGC GCGCTTGCCG GCTATTTCCG CAGCAGCAAG
CTGCTGAAGG TCGCCGGCAT CGTCATCATG GCGCTGCAGC CGATCCCGAC CTACATCATC
GGTCTCAGCC TGGTGATCCT CTTCGGTTTC ATCTGGCCGA TCCTGCCGAT CAGCGACGGC
GCGCAGGTCA ATCTCGCGCC GGCCTTCAAC TGGGCCTTCA TCAGCTCGGT GATCGAACAC
GGCATCCTGC CGGCCCTGAC CCTCGTGCTC GTCGGCATCG GCGGCTGGTT CATCTCGATG
CGCTCGCTGG TTTCCAACAT CGTCACCGAC GACCACGTCG TCTATGCCGA ACTTGGCGGC
GTGCGCTCGC GCAGCATCTT TTCGCAATAT GTGGCGCGCA ACGCCATGCT GCCGCAGGTC
ACCGGCCTGG CGCTCAGTCT CGGCAATGTC TTCGGCGGCG CCGTCATCGT CGAGTTCGTC
TTCAATTATC CCGGGATCGG CAAGCTTCTG ATCTCCGGCA TCTATTCCGG CGATTACAGC
CTCGTGCTCG GTGTCACCAC CATCGCCATC ATCGCGGTTG CCGCCGCGGT CTTCGTGATC
GACATCATCT ATCCGCTGAT CGATCCACGC GTGAAACTGG GGTAA
 
Protein sequence
MNGFLIYAAK RFLQFLFVVF TGITLAFLIA HFSPVDPIEQ TVSLLTSFGS TDPQAVEILR 
ESLRELYGTG GPLLEQYFTF WGRVLTGDFG PSLSSFPTPV MTVIGRALPW TVGLLTLATI
ISWIIGNFLG ALAGYFRSSK LLKVAGIVIM ALQPIPTYII GLSLVILFGF IWPILPISDG
AQVNLAPAFN WAFISSVIEH GILPALTLVL VGIGGWFISM RSLVSNIVTD DHVVYAELGG
VRSRSIFSQY VARNAMLPQV TGLALSLGNV FGGAVIVEFV FNYPGIGKLL ISGIYSGDYS
LVLGVTTIAI IAVAAAVFVI DIIYPLIDPR VKLG