Gene Rleg_3893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3893 
Symbol 
ID8014713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3961413 
End bp3962639 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content62% 
IMG OID644826463 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_002977675 
Protein GI241206579 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00297495 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCATAC GTCATTTTGC CTATATTTCC CTCATGGCGC TGGCTCTGTC CGGCTGCAAT 
GACGCGTTGG AAACCGCGCA GGTCGATCTT TCCAAGGTCA AGAACAAGGT CGAGCAGCCG
CTTCCCAGCC ATATCCTCGC TCAGATGTCC GCCAAGGGCA TGGACCGTAA TTCGCCGATC
ATGATCCGCA TCTTCAAGGA AGAAGGTGCC ATGGAGATCT GGAAGGCGAA AACCGACAAC
CGTTTCGACA AGATCGCCGA TTACAAGATC TGCGCCTGGT CCGGCCGTCT CGGCCCGAAG
GTAAAGACCG GCGACCGGCA GGCCCCGGAA GGTTTCTACG ACCTGACGCG CGCCAACCTG
AATCCTAATT CCAAATATTA TCTGGCGATC AATACCGGCT TCCCGAACCG CTACGACGCG
GCGAACGGCC GCAGCGGTTC CGATCTGATG ATCCACGGCG CCTGCTCCTC CTCCGGCTGC
TATTCGATGA CCGACCAGCA GGTGCTGGAG ATCTACGCTT TTGCCCGCGA CGCCTTCAAG
GGCGGCCAGG CGACCGTGCA GCTGCAGGCC TTCCCCTTCC GCATGACGGC GGAAAACATG
GTCAAGCATC GTCTCGACGG CAATTACGAC TTCTGGAAGA TGCTGAAGGT CGGTTACGAC
AATTTCGAAG TGACGAAGCG CCCGCCTGAG GTGAACGTCT GCGAGAAGAA GTACGTCTTC
AACCAGCAGG CAACCGACGG CAGCGCCTTC AATGCCGCCG GCAAGTGCCC GGCTATGTCG
ACGCCGCCGG CGCTGACGGC CGCCCTTGCC TCCTACGGCA AGACCTACGA TGCCGATTAT
GCCAAGGCGA TGAGCAAATT TGACGGCATG GCCTGGTACG ATCCCACGGA AGCCGAGCGC
AAGGCCGTGG TCGCCAAGAC GCGCAAGGGC CGCGAACTTG CTTACGCTCC GACCGGCACC
TCGCTGGAAG CCGGCCGCAT GGTCAAGGTC GCCGAACTCG AAGACATGAT GGCCAAGCGC
ACCGCGCAGG GCCTCGCTGC CAAGAGCGCG CCGGGCGCGA CACCTCTAGC ACCTGCCCAG
CCGCAGGCAG TGGCCGTCGC TGCCGCGACC CCTGCGGTCG TGCCGGTGCC GATGCAGAAC
CCACTGGCCT TTGCGGCGCC CGAACCGCAG GAAACGGCGG AAGCCACGGC AAAGAAGCCG
TTCTGGAAAT TCTGGGCGAG GAACTGA
 
Protein sequence
MRIRHFAYIS LMALALSGCN DALETAQVDL SKVKNKVEQP LPSHILAQMS AKGMDRNSPI 
MIRIFKEEGA MEIWKAKTDN RFDKIADYKI CAWSGRLGPK VKTGDRQAPE GFYDLTRANL
NPNSKYYLAI NTGFPNRYDA ANGRSGSDLM IHGACSSSGC YSMTDQQVLE IYAFARDAFK
GGQATVQLQA FPFRMTAENM VKHRLDGNYD FWKMLKVGYD NFEVTKRPPE VNVCEKKYVF
NQQATDGSAF NAAGKCPAMS TPPALTAALA SYGKTYDADY AKAMSKFDGM AWYDPTEAER
KAVVAKTRKG RELAYAPTGT SLEAGRMVKV AELEDMMAKR TAQGLAAKSA PGATPLAPAQ
PQAVAVAAAT PAVVPVPMQN PLAFAAPEPQ ETAEATAKKP FWKFWARN