| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3889 |
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| Symbol | |
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| ID | 8014709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 3958325 |
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| End bp | 3958915 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644826459 |
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| Product | shikimate kinase |
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| Protein accession | YP_002977671 |
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| Protein GI | 241206575 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.090563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00239824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGTGAAC AACTGCTGAC CGTTGCTGAC AGCTTGAAAG ACAGAGCTCG CGCCGCGCTC
GGTTCACGCA ATCTGATCCT TGTCGGCCTG ATGGGCGCCG GCAAATCCTC CGTCGGGCGC
ATCGTCGCCA GCCAGCTCTC CATTCCCTTC ATCGACAGCG ATCTCGAGAT CGAGCGGGTT
TCGCGCATGA CGATCGCCGA GCTTTTCGCC GCCTATGGCG AGCAAGAGTT TCGGGCGTTG
GAAGCGCGGG TGATCAAGCG GCTGCTAAAG AGCGGGCCGC GTGTCGTCTC TACCGGCGGC
GGCGCCTTCA TCAACGACCG GACGCGCAAA CATATCAAGA AGGGCGGCCT CTCCGTCTGG
CTGAAGGCCG ATCTCGACGT GCTCTGGGAC CGGGTCGCCA AGCGCGACAC GCGGCCGCTG
CTCAAGACCG AAAATCCGAA GCAGACGCTC GAGGGCCTGA TGAATGCGCG TTATCCGATC
TATGCGCAGG CCGACCTGAC CGTGCTTTCG CGCGACGTCC GCAAGGAAAT CATGGCCGAC
GAAGTCTTAA AGGCCTTGAT CGAAGCTCAG AAGGAAAGTG CAGCGTCATG A
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| Protein sequence | MSEQLLTVAD SLKDRARAAL GSRNLILVGL MGAGKSSVGR IVASQLSIPF IDSDLEIERV
SRMTIAELFA AYGEQEFRAL EARVIKRLLK SGPRVVSTGG GAFINDRTRK HIKKGGLSVW
LKADLDVLWD RVAKRDTRPL LKTENPKQTL EGLMNARYPI YAQADLTVLS RDVRKEIMAD
EVLKALIEAQ KESAAS
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