| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3816 |
|---|
| Symbol | prfA |
|---|
| ID | 8014644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 3888870 |
|---|
| End bp | 3889949 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644826385 |
|---|
| Product | peptide chain release factor 1 |
|---|
| Protein accession | YP_002977598 |
|---|
| Protein GI | 241206502 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0216] Protein chain release factor A |
|---|
| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGAAGC TTCCCGTTGA AAAGATGCGC GAGCTGGAAC GTCGTTTCGG CGAGATCGAG
GCGCGCATGT CGGCTGGCCC GGCTGCCGAT GTCTATGTGA AGCTCGCATC CGAATATTCC
GAGCTGCAGC CTGTCGTGAC GAAGATCCGC GTCTATGAGA AGGCGGTCGC CGAGCTTGCC
GATCTCGAAA CGCTGCTCGA GGACAGGTCG GTCGACCGCG AGATGCGCGA ACTCGCCGAG
CTGGAGCTGC CCGAGGTGAA AGAGCAGATC GAGGTGCTTG AGCAGGAGAT GCAGATCCTG
CTTCTGCCGA AGGACGCAGC CGACGAAAAG AGCGCGATCC TCGAAATCCG CGCCGGCACG
GGCGGCTCGG AAGCGGCCCT TTTCGCCGGC GATCTCTTTC GCATGTACGA GCGTTTTGCA
GCGGAAAAGG GCTGGAAGGT GGAGGTGCTC TCGGCGAGCG AGGGCGAAGC CGGCGGCTAC
AAGGAAATCA TCGCGACGAT CACCGGCAGG GGTGTCTTTG CCAAGCTGAA ATTCGAATCC
GGCGTGCATC GTGTGCAACG CGTGCCGGAA ACCGAGGCGG GTGGGCGTAT CCATACGTCG
GCCGCAACGG TTGCGGTGCT GCCGGAGGCC GAGGAGATCG ACATCGAGAT CCGAGCCGAA
GACATCCGCA TCGACACGAT GCGCTCTTCG GGTGCTGGCG GCCAGCACGT CAATACGACG
GACTCGGCAG TGCGCATCAC CCATCTTCCG AGCGGCATCG TCGTCACCAG TTCGGAAAAA
TCGCAACACC AAAATCGCGC CAAGGCGATG CAGGTGCTGC GCTCCAGGCT TTACGATGCC
GAGCGGCAGA GGGCCGATAG CGAGCGCTCT GCCGATCGCA AGAGCCAGGT CGGCTCCGGC
GATCGCTCGG AACGTATCCG CACCTATAAT TTCCCGCAGG GGCGGGTAAC GGACCATCGC
ATCAATCTGA CGCTCTATAA GCTCGACCGG ATGATGGAAG GCGAGATCGA GGAGGTCGTC
GACGCGCTGA TGGCCGATTA CCAGGCCAGC CAGCTGGCGC AGCTCGGCGA GCAACAATGA
|
|---|
| Protein sequence | MAKLPVEKMR ELERRFGEIE ARMSAGPAAD VYVKLASEYS ELQPVVTKIR VYEKAVAELA
DLETLLEDRS VDREMRELAE LELPEVKEQI EVLEQEMQIL LLPKDAADEK SAILEIRAGT
GGSEAALFAG DLFRMYERFA AEKGWKVEVL SASEGEAGGY KEIIATITGR GVFAKLKFES
GVHRVQRVPE TEAGGRIHTS AATVAVLPEA EEIDIEIRAE DIRIDTMRSS GAGGQHVNTT
DSAVRITHLP SGIVVTSSEK SQHQNRAKAM QVLRSRLYDA ERQRADSERS ADRKSQVGSG
DRSERIRTYN FPQGRVTDHR INLTLYKLDR MMEGEIEEVV DALMADYQAS QLAQLGEQQ
|
|---|
| |