Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3758 |
Symbol | |
ID | 8014589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3812846 |
End bp | 3813985 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644826321 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002977540 |
Protein GI | 241206444 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTCGC TCAAGACCCT CAGCCATCGC ATGCCGTCCG TCTCCACTCT CGTGCTCTTC GGCGCCATCG GCATCGGCGT TTCCGCCTGC TCGGAAGAGA AGGCCGAGGT CAAGCAAGTC ATCCGGCCGG TGAAGGTCGT CGAGATCGCC AAGGCCGGCG ACACCCGCAA GCTCGACTAT TCGGGCTCGG TCAAGGCGCG CACCGAGATG AACCTCGGAT TTCGCGTCGC CGGCAAGATC ACCGAACGCC TCGTCGATAT CGGAGACAAG GTGAAGCCAG GCGACGTGCT CGCTCGGATG GACTCCACCG ATTACCAGCT GGCGGTCAAG ACGGCGGAAG CCAATCTCGC AGCCGCTGAA AAGGGCGTCG AAACCGCCGA TCTCGTGAAC AAGCGCAATC AGCAGCTGTT CGACAAGAAT GTTTCGCCGA AATCCCAGCT CGAGCAAGCG TCGCTCAGTT ACGATCAGGC CGTTTCAAGC CGCGATGCCG CCGTCTCGGC GCTCGATCAG GCGAAGAACC AGGTGAGTTA TGCGGAGCTG AAGGCCGACC ACAACGGGAT TGTCACGACG ATCAATGCCG ATGTCGGCCA GGTCGTTGCG TCGGGCACTC CCGTCGTCGC CGTTGCCGTC GACGGCGAAA AGGAAGTGCA GATTGCGGTT CCAGAAAACG ACATTGCCGA ATTCAAGCCG GGCAAGACAG TCAAGGCCAG CTTCTGGGCT GACGACAGGC TGGTGCTCGA CGGCAAGGTG CGCGAGGTTT CCGGCAGCGC CGACCAGCAG TCGCGTACCT TTGCGGTTCG GGTGAGCCTG CCGAACGATC CGCAGGTGTT GCTCGGCATG ACGGCGACGA TAGAGGCCGA TGTTAGCAAC GGCAACAGCT ATGTCTCGAT CCCGCTCAGC GCCCTGGCTG AAAAGGACGG CAAGCAGATG GTCTGGACCG TCGACCGCGA CACGGCGACC GTGCACGGCC GTGACATCAA GGTTGCCGAC TTCACCGGCG ACGGCGTGCA TGTGACCGAG GGTCTCGATA CCGGCGATCT CGTCGTTTCG GCCGGCGCGC AGTTCATGAG CGAAAACCTG AAGGTGAAGG TGCCGGACCA GCAATCGGCC CTGGCCGCCA CGGACCAGAC CGTCCGCTGA
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Protein sequence | MFSLKTLSHR MPSVSTLVLF GAIGIGVSAC SEEKAEVKQV IRPVKVVEIA KAGDTRKLDY SGSVKARTEM NLGFRVAGKI TERLVDIGDK VKPGDVLARM DSTDYQLAVK TAEANLAAAE KGVETADLVN KRNQQLFDKN VSPKSQLEQA SLSYDQAVSS RDAAVSALDQ AKNQVSYAEL KADHNGIVTT INADVGQVVA SGTPVVAVAV DGEKEVQIAV PENDIAEFKP GKTVKASFWA DDRLVLDGKV REVSGSADQQ SRTFAVRVSL PNDPQVLLGM TATIEADVSN GNSYVSIPLS ALAEKDGKQM VWTVDRDTAT VHGRDIKVAD FTGDGVHVTE GLDTGDLVVS AGAQFMSENL KVKVPDQQSA LAATDQTVR
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