Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3700 |
Symbol | |
ID | 8014538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3747487 |
End bp | 3749697 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644826263 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_002977482 |
Protein GI | 241206386 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACAG CCGGAAAGTC GCAGAGCAAG GGATCGGGAA TAGGCCGTCA CATCACCGTC ACCGGCGTGC TTTTCTCCTT CGCAGTCATC GTCGCCGTCG TCACCATCAT GGTGCTGACG GCGCTGGAAC GCGTGGCCGA AAATTCCAAT GTTCTCGATG ACGAGCGCTC GCGCGAAACG ACGGTCGGTG CATTGAAGAC CTTCGAGGAT CAGCTCGGCG CGACGCTCGA CGATTACGCC GCCTGGGATG ACGCTGCCGT CAACGTCTAC GCGGCCGACG GTATGGCCTG GACGGTGAGC AACTACGGCG AGATGTCGGT CAACAGCTCG CTGTTCGACA TGGCGATCGT CATCGATGGC GAGAAGAAGG CGATCATGGC CTATCGCGAC GGCAAACCGA TGGAGGAGCC GCTCACAGAT TTCTTCGCGC CTTCGCTCTG GACCCTCTTC GACACGGTAA AGGCGGCCGG CCCGGCCGAT CGTCCTCAGG CGATCGGTTT CGTCACCACC AAGCGGGGCA TTGCCGCCGT CGGTGTGGCA TTGGTGCGGA AAAAGTCCGG TGCGCTGGAT GTGCCCGCCG GCCAGCAGCG CTATCTCGTT TTCGCCCGCC ATCTCGATGA CGACAGGGTG ACCGCTCTCG GCCAGACCTA TGTCATCGGC GGGCTGAGGC TGGCGCCGCC GAGTTTTGCG GCCGACTATC TTGTGCCGAT CGTCGATCCG ACGGGGGCAA CGCTCGGCAA GCTGGTTTGG ATCTCGCGTT CACCCGGCGA TATCGGCTAT GCACAGGTGC GGCCGATGGT CATCCAGGCG CTCGGCCTCG TCGGGTTGTT CTTCGTCGTG CTGCTGGTCA TCGGCTGGCT TGCCGGCCGC CGCCTGAAGG CGGAGGAAAA CAGCGCTCGC GAGGAGGCGC TGCGCGACAG GCTGAGCGGG CTTTCCAATC GTGATGGCCT CGGGCTGGCC GTCGATCGTT TTGTCGTCGA GGCACGCCAG ACCAAGCGCA ACGTGCTCCT CCTCTATCTC GACCTCGATG GCTTCAAGGA AGTCAATGAC AGCTATGGCC ATGGCACCGG CGACCAGTTG ATCCGTGCGG TCGCGGCCGG GCTCGCTGTG CTCATTCCGC AGGGTGCCGT TCTCGCCCGC ATCGGCGGCG ATGAATTTGC CATCGCCTTT CTCTCCGACA GTGAGAATGC CGCCGCACTA CAGCTTGCCG AGCAGATTCT CGATTTTCTT GTCGAGCCGC TGGAGATCGG TCGCCGTGTC GTTGTCGTCG GGGCAAGCAT CGGCATTGCC ATGTCGCCTT CCGGGACGAT CGGGCGTGAG GAGCTGGTGC GCCGTTCCGA CCTTGCCATG TACAAGGCGA AGGAAGCCGG CCGCGCGCGC ATGACCCTCT ACGATCCGTC GATGGACACC GATCGAGAGC AGCGCAACGC GCTGGAGCTC GATCTCCGGA TCGCCATCGA AAGCGGCGAC CTGACGCTGG CCTACCAGCC GCTGATCGAT GCGGCGACGC ATGCGATGAC CGGCGTCGAA GCACTGGTGC GCTGGAACCG TCCGGGCCAT GGCCCTGTTT CGCCCGAGCT GTTCATCCCG ATCGCCGAGA CCAGCGGCCT CATCGAATCG CTCGGTCTGT TCGTACTGCG CAAGGCCTGT GAGACGGCCA AACAATGGCC GGAACTCAAC GTCTCGGTTA ACGTCTCGCC CGGCCAGTTC CGCAATCCTG CCTTTACCGA CTATGTGCGC TACGTACTGA AACAGACGGA GATCGAGGCC GGCCGCATCA CGCTTGAGAT CACCGAAGGC TACATGATTC AGAATCCGCA GCGCACCCGC CAGTCGATCG AACGGCTGAA GGGGCTGGGG GTCAAGGTGG CGCTCGACGA TTTCGGTTCC GGCTTCTCGT CGATCGGTTA TCTCAGGCAG TTCGGCTTCG ACCGCATCAA GATCGACCGC TCGCTGGTCA TGGGCGTCAA CGACAAACGC CAGCGCGAGA TGCTGCAGGC GACGGTGGCG CTCGCCCGCT CGCTCGACAT TCCGGTGACG GCCGAAGGCA TCGAGACCGA GGAGCAGGCG ATAGCCATGC GCCTCTTCGG CTGCGACTGC CTGCAGGGCT ATTTGTTCGG CAAGCCCGTG ATATCAGAGC TTATCACCGA GATGCTGCAC GAGCGACGTG AAGCGGAGCC GGCAGCCCGG CGTCGCATCG ACGCAGCCTG A
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Protein sequence | MQTAGKSQSK GSGIGRHITV TGVLFSFAVI VAVVTIMVLT ALERVAENSN VLDDERSRET TVGALKTFED QLGATLDDYA AWDDAAVNVY AADGMAWTVS NYGEMSVNSS LFDMAIVIDG EKKAIMAYRD GKPMEEPLTD FFAPSLWTLF DTVKAAGPAD RPQAIGFVTT KRGIAAVGVA LVRKKSGALD VPAGQQRYLV FARHLDDDRV TALGQTYVIG GLRLAPPSFA ADYLVPIVDP TGATLGKLVW ISRSPGDIGY AQVRPMVIQA LGLVGLFFVV LLVIGWLAGR RLKAEENSAR EEALRDRLSG LSNRDGLGLA VDRFVVEARQ TKRNVLLLYL DLDGFKEVND SYGHGTGDQL IRAVAAGLAV LIPQGAVLAR IGGDEFAIAF LSDSENAAAL QLAEQILDFL VEPLEIGRRV VVVGASIGIA MSPSGTIGRE ELVRRSDLAM YKAKEAGRAR MTLYDPSMDT DREQRNALEL DLRIAIESGD LTLAYQPLID AATHAMTGVE ALVRWNRPGH GPVSPELFIP IAETSGLIES LGLFVLRKAC ETAKQWPELN VSVNVSPGQF RNPAFTDYVR YVLKQTEIEA GRITLEITEG YMIQNPQRTR QSIERLKGLG VKVALDDFGS GFSSIGYLRQ FGFDRIKIDR SLVMGVNDKR QREMLQATVA LARSLDIPVT AEGIETEEQA IAMRLFGCDC LQGYLFGKPV ISELITEMLH ERREAEPAAR RRIDAA
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