Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3673 |
Symbol | |
ID | 8014518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3720115 |
End bp | 3722418 |
Gene Length | 2304 bp |
Protein Length | 767 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644826236 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_002977455 |
Protein GI | 241206359 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.467962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCAG ATAACCCGAA CAGGGTCCCT ATAGATGTGT ATCTGTCGTT TGTGAGTTCC CTTTCCGGGA ACCGCATGAC GCTGCTTGCT GGCGTGATCG TGCATGTCGC GACATGCCTT GCCGTTGCTG CCAAGACCCA GTCCTTCGTC TATATCCTGC TGGCGGCCGC CTTCCTCCTG GTCTTCTGCG TTCGCATGGT CATCTTCCGG CAGTTCGACC GCGTTGACAA GGAGAGCCTG TCGCACGCCG GAATCGAGCG TTGGGAGCGG ATCCTGGTTG CCGGTGCTGC CTGCACCACC ACCCTGCTTG GCATCGCCAG CGGCTACGCC ATCTTCGTCG TCCATGATTC CTTTGCGGAA CTTGCCTGCA TTGCGGTTAC CATGGCGACC ATGGTTTCCG TTGTCGGCCG CAATTATGGT TCGCGCCTGG CGGTTGACCT CCAGACCTTT TCCTGCTGTC TGCCGATGAT TGTCTGCAGC CTGTTGGCGC TCGATTTTTA TCGTGGCTTG TTGTCGATCT TCCTCATTCC CTTCTGGCTG ACGACGCGTG CCATGGCGAA CGGCGTGCGC GAGTTCCTCT ATGAGAATGT CATCGCGCGC CGGGAAATCA CCATCATCGC CGACCGCTTC GATACGGCGC TCAACAACAT GCCGCATGGC CTAGTCATGG TCGATGCCGA AAACCGCATC CAGGTCGTCA ATCGCAAGGC CTGCGAGCTT TTGAAGATCG GTGCGCCGGA TCGGTTGAAG GACCGCGATC TCGGCGCCGT GCTACGCTAC GGCGCGCGCT ACAGCTTCAT GGACGCCTCG CAGCCGGAGC TCATCCTGCG CCAGCTCACC CAAGTCGCCG AAGGCAACCT GTCGCGCACG CTCATCCATT TCCCCGAGGG CCTGTCGCTC GAATTCTCCG CCAGCCGCAG GGCCGACGGC GGCGCCGTGC TGATCTTCGA GGACGTGTCG AGCCGGGTGA AGGCGGAGCA GAAGATCATG CACATGGTCC GCTTCGATGC GCTGACCGGC CTGCCGAACC GAGAATATTT CGGGCAGCTG GTGCAGGATT ATCTCGCCAA ACATCAAAGG AAGTCCGGGC CACTCGGCTT CATGGTTCTC GATATCGACG AGTTCAAACA TGTCAACGAC ATGCGCGGCC ACGTTACAGG CGACCACCTG CTTTGCGCCA TCGCCGCCCG CATCAAGCAG GCGTCCGGCA ACGCCATCCT CGGCCGGTTG ATGGGAGACC AGTTCATCCT GTTCTTCCCG CATGCGAAGG AACAGGCCTC GCTCGACGTC GAGATCCGCC GCGTGCACGC CGCAATCCAG GGCAACTACG CAGTCGACGA GCTGACCTTC CTGGTTTCGC TCAGCGCCGG CTACGCGATC CTCGAGAGTG CTGCGTTTGC GATGGACGAA TGGAGCGTCA AGGCGGATCT GGCGCTGTTC GAAAGCAAGT CGCGCTTCAA GGGCGGCATT TCCGGCTTCG AGCGGGAGAT GGATGGCCGC TATATCGAGC AGCAGAAGCT GAAAGCGGAT TTGCGCGACG CGGTCTCGGC GCAGGCGCTG CATCTTGCCT TCCAGCCGAT GTTCCGGTCC GACGGCTCGC GGATCGAATG CGCCGAAGCG TTGGCGCGCT GGGTGCATCC GGAGAAGGGC TCGATCCCGC CCGACGTCTT CATCCGGCTC GCCGAAGATA TGGGCATCAT CTCCGACATC ACCCGTTTCG TGTTGTTCAA GGCGTGCAGC GAATGCATGA ACTGGCCGGA ACATATCGCC GTCTCGGTGA ACCTTTCGGC GCGGGATCTG CGCGATGCCG ATATTCTCGC GGTGGTCGCC GAAGCGCTTG CCCATTCCGG TCTCGACGCG GCGCGGCTGC ATCTCGAAGT CACCGAAAGC TGCCTGATCG ACGAGCCGGC GGCTGTGCGC GCCATCCTGG CCGAGCTCAG GGCTCGCGGC ATCACCATCG CCATCGACGA TTTCGGTACC GGCTTCTCCA GCCTCAGCTA CCTCGACACA CTGCCGCTCG ATATCGTCAA GATCGATCGC TCCTTCGTGC GCAACATCGT CGAAGATAAC CGCCGCTTGA AGCTGCTGCG CGGCACGGTC CATCTCGCCC GTGAACTGGG CCTGAAGATC GTCATTGAAG GTGTCGAAAC CGAGGAGCAG CTCGCACTGC TCAACAAGCA CCGCAGCGCC GATCTTGTTC AGGGTTACGT TTTCTCGCCG CCGGTGCCTT CCCAGAATAT CCCGCTGTTG CAGCAGGGCA TCGGCCGCCG CGTCGTACAA CGCCGCCGCA ACAAGGTCGC CTGA
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Protein sequence | MKPDNPNRVP IDVYLSFVSS LSGNRMTLLA GVIVHVATCL AVAAKTQSFV YILLAAAFLL VFCVRMVIFR QFDRVDKESL SHAGIERWER ILVAGAACTT TLLGIASGYA IFVVHDSFAE LACIAVTMAT MVSVVGRNYG SRLAVDLQTF SCCLPMIVCS LLALDFYRGL LSIFLIPFWL TTRAMANGVR EFLYENVIAR REITIIADRF DTALNNMPHG LVMVDAENRI QVVNRKACEL LKIGAPDRLK DRDLGAVLRY GARYSFMDAS QPELILRQLT QVAEGNLSRT LIHFPEGLSL EFSASRRADG GAVLIFEDVS SRVKAEQKIM HMVRFDALTG LPNREYFGQL VQDYLAKHQR KSGPLGFMVL DIDEFKHVND MRGHVTGDHL LCAIAARIKQ ASGNAILGRL MGDQFILFFP HAKEQASLDV EIRRVHAAIQ GNYAVDELTF LVSLSAGYAI LESAAFAMDE WSVKADLALF ESKSRFKGGI SGFEREMDGR YIEQQKLKAD LRDAVSAQAL HLAFQPMFRS DGSRIECAEA LARWVHPEKG SIPPDVFIRL AEDMGIISDI TRFVLFKACS ECMNWPEHIA VSVNLSARDL RDADILAVVA EALAHSGLDA ARLHLEVTES CLIDEPAAVR AILAELRARG ITIAIDDFGT GFSSLSYLDT LPLDIVKIDR SFVRNIVEDN RRLKLLRGTV HLARELGLKI VIEGVETEEQ LALLNKHRSA DLVQGYVFSP PVPSQNIPLL QQGIGRRVVQ RRRNKVA
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