| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3527 |
|---|
| Symbol | |
|---|
| ID | 8015812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 3562477 |
|---|
| End bp | 3563013 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644826092 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_002977312 |
|---|
| Protein GI | 241206216 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1476] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00697962 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATAT CCGGAGCCGG CATACGCCGC ATGCGGCTGC TGCGGAGCAT GAAGCAGGAA
CATCTCGCCG AACTCCTCGG CGTCAACCAG GCGACGATCT CACGCTGGGA GCGCGATAAG
CTCGCCCTTT CGCCCGAACA GGCTATCAAG CTGGAACGGA TTTTCGCCTC GCCGCCACAT
GCAGCAGTCG ATGCGGCGCT GAAGCGGCTG GTCGAGGATT CCGTCCGGCC GGTGCATCTG
ATCTGCGACC GCACCCACCG GCTGCTCGCC ACCTCTCGCC CGCGGCACGC GGAGTGGCGG
GCGCCGCTCG GCGCCTTTCT CGGCCGCTCT CTATTCTCCT ACGCCTCCGC CGAGATCGCC
GCCGCCGAGC AGTCGCTGGA GGAGCGCGGC TGGCATGCGG GCAGGCTCTC GTCGCTGACG
CTTGATACCG GCGCCAACGG CAATGCGCTG CTGCCGATCG CCGCCGGCCG CATGACCTGG
GAAAGGATCA TGCTTTCCGA TGGCAGCGCC GGCCGCCTCG TCACGACCAT CGGCTGA
|
|---|
| Protein sequence | MTISGAGIRR MRLLRSMKQE HLAELLGVNQ ATISRWERDK LALSPEQAIK LERIFASPPH
AAVDAALKRL VEDSVRPVHL ICDRTHRLLA TSRPRHAEWR APLGAFLGRS LFSYASAEIA
AAEQSLEERG WHAGRLSSLT LDTGANGNAL LPIAAGRMTW ERIMLSDGSA GRLVTTIG
|
|---|
| |