Gene Rleg_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3488 
Symbol 
ID8014360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3522907 
End bp3523743 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content63% 
IMG OID644826053 
Productsurface antigen msp4 family protein 
Protein accessionYP_002977273 
Protein GI241206177 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.601227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0875611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA GCTTGTCCGG CATCTTCGCC GCATTGTTGA TCGCGACAAA CGCCTATTCC 
GCGGACCTCG CCCCTGCCGA GCCTATCCCG GAGCAGCCGC CTGAGGTGAC GGTCACCGAA
GCGACCGGCT GGTACCTGCG CGGCGATGTC GGCTATGCCT TCACCGATCT GCGCGGCGCC
CGCTATTTCC AGGGCAGCAA CGCCACGGAA GTCGATTTCG ACGACGCCGA CCTGGACGAC
GCATGGACAG TCGGCGGCGG TGTCGGTTAT CAGATCAACA GCTATCTGCG CACCGATCTG
ACCTTCGACT ATCTTACCCA GGCGGATTTC AAGGGCTCGA CAGTCGGGCA GTGCGGCTTC
CCGCTGGTGG ATTGCACCTC GAGCGACCGC TCCTCGCTGA CCGCCTATAC GCTGCTCGCC
AACGCCTATG TCGATCTCGG CACCTACGGC TACGTCACGC CTTATGTCGG CGCCGGTATC
GGCGGTTCCT ACGTCAAGTG GAAGAACCTG CGCAACGTCG CCTGCGCCGA TGACGGCAGC
TTCTGCGACG ACCAGGTCAC CCATGGCGGC AAGGGCAACT GGCGCTTCAC TTACGCCCTG
ATGGCCGGCG CCTCAATCGA CGTGACCTGC AACATCAAGG CCGATGTCGG CTACCGCTAC
CTGCATATCG ATGGCGGCAA CATGTTCGGC TATGCCGAAA ATGGCGGCCC GGGCCGCGAC
AAGGGTCTCA CCGCCCACGA AGCCCGAGTC GGCGCCCGCT ATCTCTTCGG CGGCTGCGCC
CAGGCGAGCT ACGAACCGCC GCCGGAAATC CCGCTGCAGC AGCCGATCTA CAAGTAA
 
Protein sequence
MKRSLSGIFA ALLIATNAYS ADLAPAEPIP EQPPEVTVTE ATGWYLRGDV GYAFTDLRGA 
RYFQGSNATE VDFDDADLDD AWTVGGGVGY QINSYLRTDL TFDYLTQADF KGSTVGQCGF
PLVDCTSSDR SSLTAYTLLA NAYVDLGTYG YVTPYVGAGI GGSYVKWKNL RNVACADDGS
FCDDQVTHGG KGNWRFTYAL MAGASIDVTC NIKADVGYRY LHIDGGNMFG YAENGGPGRD
KGLTAHEARV GARYLFGGCA QASYEPPPEI PLQQPIYK