Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3488 |
Symbol | |
ID | 8014360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3522907 |
End bp | 3523743 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644826053 |
Product | surface antigen msp4 family protein |
Protein accession | YP_002977273 |
Protein GI | 241206177 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.601227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0875611 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA GCTTGTCCGG CATCTTCGCC GCATTGTTGA TCGCGACAAA CGCCTATTCC GCGGACCTCG CCCCTGCCGA GCCTATCCCG GAGCAGCCGC CTGAGGTGAC GGTCACCGAA GCGACCGGCT GGTACCTGCG CGGCGATGTC GGCTATGCCT TCACCGATCT GCGCGGCGCC CGCTATTTCC AGGGCAGCAA CGCCACGGAA GTCGATTTCG ACGACGCCGA CCTGGACGAC GCATGGACAG TCGGCGGCGG TGTCGGTTAT CAGATCAACA GCTATCTGCG CACCGATCTG ACCTTCGACT ATCTTACCCA GGCGGATTTC AAGGGCTCGA CAGTCGGGCA GTGCGGCTTC CCGCTGGTGG ATTGCACCTC GAGCGACCGC TCCTCGCTGA CCGCCTATAC GCTGCTCGCC AACGCCTATG TCGATCTCGG CACCTACGGC TACGTCACGC CTTATGTCGG CGCCGGTATC GGCGGTTCCT ACGTCAAGTG GAAGAACCTG CGCAACGTCG CCTGCGCCGA TGACGGCAGC TTCTGCGACG ACCAGGTCAC CCATGGCGGC AAGGGCAACT GGCGCTTCAC TTACGCCCTG ATGGCCGGCG CCTCAATCGA CGTGACCTGC AACATCAAGG CCGATGTCGG CTACCGCTAC CTGCATATCG ATGGCGGCAA CATGTTCGGC TATGCCGAAA ATGGCGGCCC GGGCCGCGAC AAGGGTCTCA CCGCCCACGA AGCCCGAGTC GGCGCCCGCT ATCTCTTCGG CGGCTGCGCC CAGGCGAGCT ACGAACCGCC GCCGGAAATC CCGCTGCAGC AGCCGATCTA CAAGTAA
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Protein sequence | MKRSLSGIFA ALLIATNAYS ADLAPAEPIP EQPPEVTVTE ATGWYLRGDV GYAFTDLRGA RYFQGSNATE VDFDDADLDD AWTVGGGVGY QINSYLRTDL TFDYLTQADF KGSTVGQCGF PLVDCTSSDR SSLTAYTLLA NAYVDLGTYG YVTPYVGAGI GGSYVKWKNL RNVACADDGS FCDDQVTHGG KGNWRFTYAL MAGASIDVTC NIKADVGYRY LHIDGGNMFG YAENGGPGRD KGLTAHEARV GARYLFGGCA QASYEPPPEI PLQQPIYK
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