Gene Rleg_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3478 
Symbol 
ID8014349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3512176 
End bp3512940 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content62% 
IMG OID644826042 
ProductABC transporter related 
Protein accessionYP_002977263 
Protein GI241206167 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.213105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGG TCTTCGAAGT CGCCAATCTC AAGAAAGCCT TCGGCGGCCT GGCCGTCACC 
AATAATGTCT CGCTCACGAT GTCGCCTGGC GATCGCATCG CGCTGATCGG CCCGAACGGC
GCCGGCAAGA CCACCTTCGT CAACCTCGTG ACCGGCAATC TATCGCCCGA TTCCGGCGAG
GTTCGTCTCG GCGGCGAGGT GGTGACGAAG GTCGATGCGA TCGGCAGGGT CAGACGCGGC
CTTGTCCGCT CCTTTCAGGT GACGCGGCTC TTCCAGGACA TGACGCCGGC CGAACATGTG
GGACTTGCCG TCCTTCAGCG CGATGGAAAG ACCGGGCACA TGTTCGGCAA TTTCCTGCGC
ATGCCCGATG TCATGGCCGA GGTCGATGAT CTCCTTGGAA AACTCGGACT GGCTTTCCTG
ATGCATCGCA AGGTCAGCGA AATCGCCTAT GGCCAGCAGC GACTTCTCGA GATCGCCGTG
GCGCTGGCGC TGAAGCCGAA AGTGCTGTTG CTCGACGAGC CGGCAGCCGG CGTGCCGCAG
AGCGATACCG GCCGCATCGA GCAGGCGCTC GCCGATCTGC CCGCCGATCT CGCTGTGCTG
ATGATCGAAC ACGACATGGA TCTCGTCTTC CGTTTTGCCA AACGCGTCAT CGTGCTTGCA
TCAGGCACGA TCATCTTCGA TGGCCTGCCG GAAGACGTCA CCAAGGATGC GCGCGTGCGC
GAGGCCTATC TCGGGAGCTA TGCCAATGCC AGCCCTGTCG CTTGA
 
Protein sequence
MSPVFEVANL KKAFGGLAVT NNVSLTMSPG DRIALIGPNG AGKTTFVNLV TGNLSPDSGE 
VRLGGEVVTK VDAIGRVRRG LVRSFQVTRL FQDMTPAEHV GLAVLQRDGK TGHMFGNFLR
MPDVMAEVDD LLGKLGLAFL MHRKVSEIAY GQQRLLEIAV ALALKPKVLL LDEPAAGVPQ
SDTGRIEQAL ADLPADLAVL MIEHDMDLVF RFAKRVIVLA SGTIIFDGLP EDVTKDARVR
EAYLGSYANA SPVA