| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3468 |
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| Symbol | |
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| ID | 8014339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 3499118 |
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| End bp | 3500689 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644826032 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002977253 |
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| Protein GI | 241206157 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTGT TTTTCCAAAG CAGGGCCGGA CGGCAATGCG TGTCGATCGT GGTGTCTGGA
GTGACCCTCT GGCTTCTCGG CACGCTGCTA CAGCTCGACG ACAGCCTGGT CGCCTTCATG
ACCGGCTTCG GCGAGTACGG CGCCGACAAG CTCGTTCTGG CGCTCGGCAT CGCCGGCGCC
ATGAGCTTCG TCTATTCGGT GCTGCGCATC GCCGACCTGC GTAAGGAAAT GGAACTGCGC
GCGGCCGCCC AGGCAAAAGC CGATTGGACC GCAACCCACG ACCATCTCAC CAAGCTGCCG
AACCGCTACG CCTTCGAGCG CAAGATCCTC TCCCGGCCGA TCAAGGACGA CGAGGCCGAG
ATCGAGGAGT GGGACCGCAA CGTCACCATC TTCTCCGTTG ACCTCGACGG CTTCAAGAAG
GTCAATGACC TCGTCGGCCA CAAGGGCGGC GACATCCTGT TGATCGAGGT TGCCAGACGC
ATCTGCGCGC TCGGCAATGC CGATTGCGTC TATCGCTTCG GCGGCGACGA ATTCATCATC
GTCGCCTTCG CCCTGACGGC GCAGCGCGAG GAGCGTTTTG CCAAGCTGCT GATCCAGGCC
GTCACCCGGC CGATCCATAT CGATGGCTTT GCCGTCGAAG TCGGCGCCAG CGTCGGCTAT
GACCGCTGGG CCGAGGGAGC CGAGCCGCTG GAAGATGCCG CCCACCGTGC CGACCTCGCC
ATGTACGAGG CGAAATCACG CGGACCCAAC CACTATTTCG TCTTCGAACC TTCGATGCAG
GACAAGGTAA CGGAACGCGC CGCGCTGGAA ACCAGGCTGC GCGCCGCGAT CTCCAACAAG
GCGATCAAGC CCTTCTATCA GCCGCTGATC GACCTCAAGA CCGGCCAGCT CTGCGGCTTC
GAGGCCTTAG CGCGCTGGAT CGGCGACGAC GGCGTCAACA TCCCGCCGCC GGTCTTCATC
GATATCGCCG AGGAAACCGG CATGATCACG GCATTATTCG AGGATCTCCT CACCCAGGCC
TGCAGCGACG CACTCGCCTG GCCGGATCAT GTGACGTTGT CCTTCAACGT CTCGCCGGTG
CAGATGGAAG ACAGATTGCT GACATCGCGT ATTCTCAAGG TCCTTTCGGC AAGCCGGCTG
CCGCCGCAGC GCCTGGAAGT GGAGATCACC GAAAACGCGC TGATCCAGGA TCCCGCCATC
GCCGCCCTCA TTCTCGACGA GCTGCACGCC GCCGGCATCC AGATCGCACT CGACGATTTC
GGCACGGGCT ATTCGAGCCT CGCCCAGCTT TCCCGCTATC GTTTCGACAA GATCAAGATC
GACAAAAGCT TCATCGCCAC CTATCGCGAC GACGAGCGGC AGGAAAAGAT CGTCCGCGCC
ATGCTCGGCC TCGGCAGGAG CCTCAACATC AAGACGACGG CGGAAGGTAT CGAGGAGCAC
GGCCAGCTCG CCTTCCTGCT GCAGCTTGGC TGCGACATCG GCCAGGGCTA TCTTTTCGGC
AAGGCGATGC CCGCCGCCGA GGCGGGCATC TTCATCAGCG ATCGCAATAC CAAATTGGCC
TCGACGGGCT GA
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| Protein sequence | MPVFFQSRAG RQCVSIVVSG VTLWLLGTLL QLDDSLVAFM TGFGEYGADK LVLALGIAGA
MSFVYSVLRI ADLRKEMELR AAAQAKADWT ATHDHLTKLP NRYAFERKIL SRPIKDDEAE
IEEWDRNVTI FSVDLDGFKK VNDLVGHKGG DILLIEVARR ICALGNADCV YRFGGDEFII
VAFALTAQRE ERFAKLLIQA VTRPIHIDGF AVEVGASVGY DRWAEGAEPL EDAAHRADLA
MYEAKSRGPN HYFVFEPSMQ DKVTERAALE TRLRAAISNK AIKPFYQPLI DLKTGQLCGF
EALARWIGDD GVNIPPPVFI DIAEETGMIT ALFEDLLTQA CSDALAWPDH VTLSFNVSPV
QMEDRLLTSR ILKVLSASRL PPQRLEVEIT ENALIQDPAI AALILDELHA AGIQIALDDF
GTGYSSLAQL SRYRFDKIKI DKSFIATYRD DERQEKIVRA MLGLGRSLNI KTTAEGIEEH
GQLAFLLQLG CDIGQGYLFG KAMPAAEAGI FISDRNTKLA STG
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