| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3446 |
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| Symbol | |
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| ID | 8014320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 3474594 |
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| End bp | 3477704 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644826010 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002977231 |
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| Protein GI | 241206135 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.522108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGT TTTTCATCCG ACGTCCGATT TTCGCTTGGG TCATTGCGAT CACCATCATG
CTCGCCGGCC TGCTGGCGAT TTTCACGCTG TCGATCTCGC AATATCCCGA CATCGCCCCG
ACGACGGTTC GCATCAACGC CACCTATCGC GGCGCCAGCG CCGAGACTGT CGAGAAATCG
GTGACGACGA TCATCGAGGA CGGCATGACC GGCCTCGACG ACCTCACCTA CATGACCTCG
ACCTCATCGA CGGGTTCGGC CAGCATCCAG CTCACCTTCG GAACGAGCGC CGACCCCGAT
ATCGCCCAGG TGCAGGTGCA GAACAAGCTG CAGCTGGTTC AGTCGCAGCT TCCAAGCGAC
GTCATCGATG CCGGCATCAG CGTCACCCGC TCGACCTCGA GCATCCTTCT CGTCGGCTCG
CTCGTTTCGA CCGACGGCAA GCGCAATTCT GTCGACCTCG GCAATATCAT GTCGACCTCG
ATCGAGGATC AGATCCAGCG CCTGGAAGGC GTCGGCAGCA TCAATGTCTT CGGTTCAGGA
TACGCCATGC GCGTCTGGCT CGATCCGTTC AAGCTGCTGA AATACCAGTT GACGCCGAGC
GACGTGACGT CAGCCATCCA GGCGCAGAAC ACCCAGGTCT CCGTCGGTTC GCTCGGTGCC
CAGCCGACGA TCCCCGGCCA GCAGATCAAC GTCACCATCA CCGCCCAAAG CCAGCTGACC
ACCGTCGCCG ATTTCGAGCA CATCATCCTG AAGGTCGAAA AGGACGGCGC GACGGTGCGC
TTGAGCGACG TCTCGCGCAT CGAGATCGGG CAGGAAAGCT ACGGCGGCAG TTCGCGCTAC
AACGGCCAGC CGTCGACCGG TTTCGCCGTC AATCTTGCAA TTGGCGCCAA CGCCATCGAT
ACCGCCGCCC GTGTGCGCTC CGCGCTCGAG GTTATCGGCC GCGGCCTGCC GGCAGGTGTC
GAGATCACCT ATCCCTACGA CACCACGCCC TTCGTGGAAC TGTCGATCGA GAAGGTCGTG
CACACGCTGA TCGAGGCGAT CGTGCTCGTC TTCGTGGTGC TGCTCGTCTT CCTGCAGAAT
CTCCGGGCGA CGCTGATCCC GACGATTGCG GTTCCCGTGG TGCTGCTCGG CACCTTCGGG
GTGCTGGCGG TCACCGGCTA TTCGATCAAT ACCTTGACGA TGTTCGCCAT GGTGCTGGCG
ATCGGCCTTC TCGTCGACGA TGCCATCGTC GTCGTCGAAA ACGTCGAACG CATCATGTCC
GAAGAAAAGC TTTCGCCGCT CGAGGCAACG GAAAAATCGA TGGGCGAGAT CACCGGCGCC
ATCGTCGGCA TCGCGCTCGT CCTCACCGCC GTCTTCATTC CGATGGCCTT CTTCGGCGGT
TCGACCGGCA TCATCTATCG CCAGTTCTCG ATCACCATCG TCTCGGCCAT GCTGCTGTCG
GCGCTCGTCG CCCTCGTGCT GACGCCCGCA CTTTGCGCCA CGATGCTGAA GCCGGTCGGC
GAACACAGGA AGCACCGCGT CGGCGACTGG TTCAACCGCA ACTTCACGCG CTCGACCAAC
GGCTATATCA CCACCATCGG CTATCTGCTG AAGCGTCCGA TCCGCGTCAT GCTGGTCTTC
CTTCTGGTCG GCGCCGGCTG CGCCTATCTC TTCACCCGCC TGCCGAGCTC CTTCCTGCCG
CAGGAAGACC AGGGCGTGCT GCTGACCATC GTCACCACGC CGCCGGGCTC GACCACGCAG
CAGACCCAGG CAGTCGTCGA AAAGGTCGAG AAATACTATC GTGAAAACGA GAAGGACGCC
GTCGATTCCG TGTTCGGCGC GCTCGGCTTC GGCTTCAGCG GTTCCGGCCA GAACAGCGCC
ATCGTCTTCA CCAAACTCAA GGATTTCTCG CTGCGCACCG ATCCGACGCT GAGCGCCCAG
TCAGTCGTCA ACCGTGCGCT TGGCAATTTC TTTGCGATCC GCGAGGCGCA GGTCTTCGCG
TTGCTGCCGC CGGCGATCCA GGGTCTCGGG GTGTCGAGCG GCTTCTCCAT GTATCTCGTC
GACACCGGCG GCCACGGCAA TGACGCCCTG ACGGCCGCCT CCAAGCGGCT GATCCAGATG
GGCAATAGCT CAGGCAAGAT CGTGGCGCTG CGCAGCAGCA ACAAGGAAGT CGAGCCGCAG
ATGCGCATCG TGCTCGATCA GGAAAAGATT GGCGCCATGG GCGTCGACAT CGCCTCGGTC
AATTCGATGC TGTCGATCAT CTTCACCGGC CGTGACGTCA ACGACTTCAC GCTGAACGGC
GAGATCAAGC CGGTCTACGT CGAGGGCGAT GCGCCCTTCC GCATGCAGCC GAGCGACCTC
AACCACTGGT ACGCCCGCAA CAATGACGGC GAAATGGTGC CCTTCTCCGC CTTTACCCGC
ACGGAATGGG TGAAGGGCGC GCCCTCGCTT GCCCGCTTCA ACGCCGTCAG CGCCATTCCG
CTCGACGGCG CTTCCGCACC CGGGGTTTCT TCCGGCGATG CGATGAACGA AATGGAAGCA
CTGACCAATC AGCTCGGCGG CGGTTATACG GTCGCCTGGC AGGGCATCTC CTATCAGGAG
CGGCTGTCCG GTTCGCAGGC GCCGATGCTC TACGCGATCT CGGTACTGGT CGTCTTCCTC
TGCCTGGCAG CGCTTTACGA AAGCTGGTCG ATCCCCTTCT CGGTGATCAT GGCGGTGCCT
GTCGGCATCC TCGGGGCGCT GACGGCGGCA ACCCTCTTCG GCCAGGCGAA CGACGTCTAT
TTCAAGGTCG GCTTGCTGAC CACTATCGGG CTGGCGGCGA AGAACGCCAT CCTGATCGTC
GAATTCGCCA AGGACCGCAT GGAAAGCGGC ATGGGGCTCT ACGAGGCGAC ATTGGAAGCG
GCGAGATTGC GCCTGCGGCC GATCATTATG ACCTCGCTTG CCTTCATTCT CGGCGTCGTG
CCGCTGGCGA TCGCGACAGG CGCGGGCTCG GCGGCACAGA ATGCCATCGG CATCGGCGTT
CTCGGCGGCA TGCTGGCGGC GACAATGCTC GGAATTTTCT TCGTGCCGTC GTTTTTCGTC
GTCATCCGAC GCATCTTTGC CACACGCGGC AAAAATGCGG CAGGACTGTG A
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| Protein sequence | MAKFFIRRPI FAWVIAITIM LAGLLAIFTL SISQYPDIAP TTVRINATYR GASAETVEKS
VTTIIEDGMT GLDDLTYMTS TSSTGSASIQ LTFGTSADPD IAQVQVQNKL QLVQSQLPSD
VIDAGISVTR STSSILLVGS LVSTDGKRNS VDLGNIMSTS IEDQIQRLEG VGSINVFGSG
YAMRVWLDPF KLLKYQLTPS DVTSAIQAQN TQVSVGSLGA QPTIPGQQIN VTITAQSQLT
TVADFEHIIL KVEKDGATVR LSDVSRIEIG QESYGGSSRY NGQPSTGFAV NLAIGANAID
TAARVRSALE VIGRGLPAGV EITYPYDTTP FVELSIEKVV HTLIEAIVLV FVVLLVFLQN
LRATLIPTIA VPVVLLGTFG VLAVTGYSIN TLTMFAMVLA IGLLVDDAIV VVENVERIMS
EEKLSPLEAT EKSMGEITGA IVGIALVLTA VFIPMAFFGG STGIIYRQFS ITIVSAMLLS
ALVALVLTPA LCATMLKPVG EHRKHRVGDW FNRNFTRSTN GYITTIGYLL KRPIRVMLVF
LLVGAGCAYL FTRLPSSFLP QEDQGVLLTI VTTPPGSTTQ QTQAVVEKVE KYYRENEKDA
VDSVFGALGF GFSGSGQNSA IVFTKLKDFS LRTDPTLSAQ SVVNRALGNF FAIREAQVFA
LLPPAIQGLG VSSGFSMYLV DTGGHGNDAL TAASKRLIQM GNSSGKIVAL RSSNKEVEPQ
MRIVLDQEKI GAMGVDIASV NSMLSIIFTG RDVNDFTLNG EIKPVYVEGD APFRMQPSDL
NHWYARNNDG EMVPFSAFTR TEWVKGAPSL ARFNAVSAIP LDGASAPGVS SGDAMNEMEA
LTNQLGGGYT VAWQGISYQE RLSGSQAPML YAISVLVVFL CLAALYESWS IPFSVIMAVP
VGILGALTAA TLFGQANDVY FKVGLLTTIG LAAKNAILIV EFAKDRMESG MGLYEATLEA
ARLRLRPIIM TSLAFILGVV PLAIATGAGS AAQNAIGIGV LGGMLAATML GIFFVPSFFV
VIRRIFATRG KNAAGL
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