Gene Rleg_3394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3394 
Symbol 
ID8014271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3411303 
End bp3412187 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content65% 
IMG OID644825952 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002977179 
Protein GI241206083 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.181077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGCA CTTGGCTGAC AACGCGCGCG TGGCTTTTGA TGCTGCCGCT TCTCGTGGTC 
ATGATATCAG TCATCGGCTG GCCTCTGATC GATACCGTCG GCCTCTCCTT CACCGATGCC
AAGCTCGTCG GCACCGAAGG AAACTTCGTC GGCATCGACA ATTACGCGAA GATGATCACC
GGCTCGAATT TCCAGCGCAC GCTGATCACC ACCGCATGGT TCGCGATCGT CTCGGTCGCC
GCCGAAATGG CGATCGGCGT TCTGGCAGCC CTGCTGCTGA ACCAGCAGTT TCGCGGCCGC
ACCGCGCTGC GCGCCCTGAT GATCCTGCCC TGGGCACTGC CGACCGTCGT CAACGCCACA
CTCTGGCGGT TGATCTACAA TCCCGAATAC GGCGCGCTAA ACGCCGCGCT GACCCAACTC
GGACTGCTGG AGGCCTACCG CTCCTGGCTC GGCGAACCGG GCACGGCGCT GGCGGCCCTC
ATCGTCGCCG ACTGCTGGAA GAATTTCCCG CTGGTGGCGC TGATCGCACT GGCCGCCCTC
CAGGCCGTGC CGCGCGACAT CACCGCCGCC TCGCTGGTCG ACGGCGCCGG CGCTTTCGCT
CGCTTCCGCT TCGTCATCCT GCCCTATCTC GCCGGCCCGC TGATGGTGGC CCTGGTGCTG
CGCACGATCG AAGCCTTCAA GGTCTTCGAC ATCATCTGGG TCATGACCCG CGGCGGCCCG
GCCAACAGCA CGCGCACGCT GTCGATCCTC GTCTATCAGG AAGCCTTCTC CTTCCAGCGG
GCAGGTTCGG GCGCATCGCT GGCATTGATC GTCACGCTGC TGGTGACGCT GCTTGCTGCC
GCCTACGCCG CTCTGGTGCG CAAGACCGCC GGGAGTGCGG CCTGA
 
Protein sequence
MSGTWLTTRA WLLMLPLLVV MISVIGWPLI DTVGLSFTDA KLVGTEGNFV GIDNYAKMIT 
GSNFQRTLIT TAWFAIVSVA AEMAIGVLAA LLLNQQFRGR TALRALMILP WALPTVVNAT
LWRLIYNPEY GALNAALTQL GLLEAYRSWL GEPGTALAAL IVADCWKNFP LVALIALAAL
QAVPRDITAA SLVDGAGAFA RFRFVILPYL AGPLMVALVL RTIEAFKVFD IIWVMTRGGP
ANSTRTLSIL VYQEAFSFQR AGSGASLALI VTLLVTLLAA AYAALVRKTA GSAA