Gene Rleg_3336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3336 
Symbol 
ID8014219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3340300 
End bp3341001 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content58% 
IMG OID644825895 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002977122 
Protein GI241206026 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.523001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTAC TTCTAATCGA GGATGACAGC GCGACGGCGC AGAGCATCGA GTTGATGCTG 
AAATCAGAGA GTTTTAATGT TTATACCACC GATCTCGGTG AAGAAGGCGT CGATCTGGGC
AAGCTGTATG ATTATGACAT CATCCTTCTC GATCTGAACC TGCCCGACAT GTCCGGATAT
GAAGTGCTTC GCACTCTTCG GCTGTCCAAG GTCAAGACAC CGATCCTCAT CCTGTCGGGC
ATGGCCGGCA TCGAAGACAA GGTTCGCGGC CTCGGTTTCG GCGCTGACGA CTACATGACC
AAGCCGTTCC ATAAGGACGA GCTCGTCGCC CGCATCCACG CCATCGTCCG TCGCTCCAAG
GGCCACGCCC AATCGGTCAT CATGACCGGC GAACTGATCG TCAACCTCGA TGCCAAGACG
GTCGAAGTCG GGGGCCAGCG CGTCCACCTG ACGGGCAAGG AATATCAGAT GCTGGAGCTG
CTTTCGCTCC GCAAGGGCAC CACCCTCACC AAGGAAATGT TCCTGAACCA CCTCTACGGC
GGCATGGACG AACCGGAACT GAAGATCATC GACGTCTTCA TCTGCAAGCT CCGCAAGAAG
CTCGCCAACG CTGCAGGCGG CGCCAACTAC ATCGAGACCG TCTGGGGCCG TGGTTACGTT
CTTCGCGAGC CGGATGGTGC CGAATACGCC GAAACCGCCT GA
 
Protein sequence
MRVLLIEDDS ATAQSIELML KSESFNVYTT DLGEEGVDLG KLYDYDIILL DLNLPDMSGY 
EVLRTLRLSK VKTPILILSG MAGIEDKVRG LGFGADDYMT KPFHKDELVA RIHAIVRRSK
GHAQSVIMTG ELIVNLDAKT VEVGGQRVHL TGKEYQMLEL LSLRKGTTLT KEMFLNHLYG
GMDEPELKII DVFICKLRKK LANAAGGANY IETVWGRGYV LREPDGAEYA ETA