Gene Rleg_3323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3323 
Symbol 
ID8014207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3328523 
End bp3329644 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content61% 
IMG OID644825882 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002977109 
Protein GI241206013 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.41386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGT CTCTTCTGTC GGCAGTGGCT CTGACGGCGA TGGTCGCCTT CAGCGGCAAC 
GCGTGGGCCG ACGTTCTCAT CGCTGTCGCT GGTCCACTGA CTGGACCGAA CGCCGCATTC
GGCGCTCAGC TCCAGAAGGG TGCCGAACAG GCAGCCGCCG ACATCAACGC GGCTGGCGGC
ATCAACGGCG AGCAGATCAA GATCGAGCTC GGCGACGACG TCTCCGACCC GAAGCAGGGC
ATTTCGGTCG CCAACAAGTT CGCCGCTGAC GGCGTCAAGT TCGTCATCGG CCACTTCAAC
TCGGGCGTTT CGATCCCGGC TTCGGAAGTC TATGCCGAAA ACGGCATCCT CGAAATCACC
CCGGCCGCGA CGAACCCGAC CTTCACGGAA CGGGGCCTCT GGAACACGTT CCGCACCTGC
GGCCGTGACG ACCAGCAGGG TGCCATCGCC GGCAAGTATC TTGCCGATCA CTTCAAGGAC
GCCAAGATCG CTGTCGTTCA CGACAAGACA CCTTACGGTC AGGGCCTTGC CGACGAAACC
AAGAAGGCTA TGAACGCCGC CGGCGTCACC GAAGTCATTT ACGAAGGCAT CAATGTCGGC
GACAAGGACT TCTCGGCACT CATCGCCAAG ATGAAGGAAG CCGGCGTCTC GATCATCTAT
TGGGGTGGTC TGCACACCGA AGCCGGTCTC ATCATCCGCC AGGCGGCCGA CCAGGGCCTG
AAGGCGACGC TGGTTTCGGG CGACGGTATC GTTTCGAACG AACTGGCCTC GATCGCTGGC
GACGCCGTTG CCGGTACGCT GAACACCTTC GGCCCGGATC CGACGGCGAA CCCTGCGAAC
AAGGAACTCG TCGAAAAGTT CAAGGCCGCT GGTTTCAATC CGGAAGCCTA CACGCTCTAT
TCCTACGCTG CGATGCAGAC GATCGCCGGA GCCGCCAAGG CTGCCGGTTC GCTGGATCCT
GAGGCCGTTG CCAAGGCCAT GAAGGAAAAG GGCCCGTTCC CGACCGTTCT CGGCGACATT
TCGTTCGACG AAAAGGGCGA CCCGAAGATT CCTGGCTACA TCATGTACGA ATGGAAGAAG
GGTCCGGACG GCAAGTACAG CTACTTCCCG CAGGGCATGT AA
 
Protein sequence
MKKSLLSAVA LTAMVAFSGN AWADVLIAVA GPLTGPNAAF GAQLQKGAEQ AAADINAAGG 
INGEQIKIEL GDDVSDPKQG ISVANKFAAD GVKFVIGHFN SGVSIPASEV YAENGILEIT
PAATNPTFTE RGLWNTFRTC GRDDQQGAIA GKYLADHFKD AKIAVVHDKT PYGQGLADET
KKAMNAAGVT EVIYEGINVG DKDFSALIAK MKEAGVSIIY WGGLHTEAGL IIRQAADQGL
KATLVSGDGI VSNELASIAG DAVAGTLNTF GPDPTANPAN KELVEKFKAA GFNPEAYTLY
SYAAMQTIAG AAKAAGSLDP EAVAKAMKEK GPFPTVLGDI SFDEKGDPKI PGYIMYEWKK
GPDGKYSYFP QGM