Gene Rleg_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3253 
Symbol 
ID8014143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3258651 
End bp3259760 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content63% 
IMG OID644825813 
ProductABC-2 type transporter 
Protein accessionYP_002977040 
Protein GI241205944 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0790326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGACAA GGCTCTACGC CCTGATCGTC AAGGAACTGC TCGCCGTCCT GCGTGATCCC 
AAGGGCCGCG CCATCCTGAT CGGCCCGCCG ATCGTCCAGC TTCTCGTCTT CTCCTATGCG
GCGACGCTCG AAGTCCGCAA TGTCGACGTG ATGATCCTCA ACCGCGACAA CGGTCACTGG
GGCCAGGAAC TGATCGAGCG CATCGATGGC TCGCCAACCT TCCGGAAAAT CGAGATTGCA
GGAAGCCAGG CGGAGGTCCG GGTGGCGATC GACAACCAGA CGGCCATTGC GGCCGTTGAG
ATCGGCCCGG ACTTTTCCCG CAATATTGAG GCGGGAGCGC CGGCCGACCT GCAGGTGGTG
CTCGACGGCC GCCGCTCCAA CGCCTCGCAG ATCGTCGCGG GCTATCTCTC GCAGATCGGG
GCGGCGCTTG CCGCCGAGAC GCCGGCCGGC AAACGTGCCG GCGCCGACAT CGTCTCGACA
GTGCCGCGCA ACTGGTTCAA CCCGAACCTG ACCTATCAAT GGTTCATGGT GCCGAACCTG
ATCGCCAGCA TCGCGCTGCT GATCGGTCTC ATCGTCACGG CGCTGTCGAT CGCCCGCGAG
CGCGAACTCG GCACCTTCGA CCAGTTGATG GTCTCGCCGC TGCGCATCCA CGAGATCCTG
ATCGGCAAAC TGATCCCACC GATGATGATC GGCCTCTTCC ACATCACCGT CTATATCCTG
GCCGCCGTCT TCCTCTTCGA GGTGCCGCTG CGCGGCTCGC TCTTCCTGCT TTACGGCAGC
GCGATCTTCT ATCTCGGCTC GGTCGCCGGC CTTGGCCTCT TCATCTCGGC GCTGTCGATG
ACGCAACAGC AGGCGATCCT CGGCGCCTTC CTTTTCATGG TTCCGGCCAT GCTGCTCTCA
GGCTTTGCGA CGCCGATCGA GAACATGCCG GGATGGTTGC AGCCGGTGAC CCTGATCAAT
CCGCTGCGCT ATTTCCTGGT GATCGTCAAA GGCGTCTTCC TGAAGGATAT TCCGCTGAGC
GAGGTGGTGA ACCAGACGAT CCCGCTGGCG CTGATCGCCA CTGTTACGCT CAGCGCCGCC
GCCTGGCTCT TCCGCCGGCG GCTGGAATAA
 
Protein sequence
MWTRLYALIV KELLAVLRDP KGRAILIGPP IVQLLVFSYA ATLEVRNVDV MILNRDNGHW 
GQELIERIDG SPTFRKIEIA GSQAEVRVAI DNQTAIAAVE IGPDFSRNIE AGAPADLQVV
LDGRRSNASQ IVAGYLSQIG AALAAETPAG KRAGADIVST VPRNWFNPNL TYQWFMVPNL
IASIALLIGL IVTALSIARE RELGTFDQLM VSPLRIHEIL IGKLIPPMMI GLFHITVYIL
AAVFLFEVPL RGSLFLLYGS AIFYLGSVAG LGLFISALSM TQQQAILGAF LFMVPAMLLS
GFATPIENMP GWLQPVTLIN PLRYFLVIVK GVFLKDIPLS EVVNQTIPLA LIATVTLSAA
AWLFRRRLE