Gene Rleg_3227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3227 
Symbol 
ID8014120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3230261 
End bp3231874 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content56% 
IMG OID644825788 
ProductCarbohydrate-binding and sugar hydrolysis 
Protein accessionYP_002977015 
Protein GI241205919 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.751454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCT ACTATGTAAA TTCGGCAACA GGATCCAATC AGAACAGTGG AGTGAGCGAG 
CAGTCGGCTT TCGCGACGCT TTCCGCTGTC GAATCCCTGA GGCTAAAGCC GGGAGACAGC
GTGCTGCTTG CCGCCGGAAG CGTGTTTAAC GAGCAATTCG ACCTGAAATA CTCCGGCACT
GTCAGTTCTC CGATTACAAT TGGCAGTTAC GGCGTTGGCG ATGCGCCGGT TATTCACAGC
AGCAATGACG GTATCCACGG CTCGAAGGCT TCAAACATCA TCGTGGAGAA CATCAAGATT
GCTGATACCG GGGGTGCGGC GATATATGCG GGAAATGTCT CCAACTGGAC CGTCCGCAAC
GTCGAGGTCG AAAATACCGG ACTTGCCGGC AAGCCCGGTT CCGTCAATTT CCAGAGCAGC
CAGAACATTA CCATCGAGAA CAGCAAGATT TCCGGGGTAA ATGGAGACGG CATCTGGATG
GATAAAGTGA TTGGCGTTAC CATCGTTAAT AATCTGGTCA TCAACAGCCA GGGCGCTGCG
GCAGACGCCG TTCAGTTGAA CGACAGCAGC AATATCCTGA TCAAGGGTAA CCACCTAGAG
CAGACGGAGA CCAATAGCGC AAAGGGCGTC CTGGTGCTTG TTCGGGCTGT GGATGCAGCG
GTCGAGGACA ACACCGTGAT CGGCGGCGGT TTCGGGATAG GTGCCAACGC GGGCACGAAT
ATCGCCATCC ACGACAACGA CATCTCGGGA TACGGCGGCT ATAGTTGGTC CTACGGTATC
GGCCTTGGCG ATCAGGGCAA TGCGACAAAT TACGATATCA GTGGAAACTA TATCCATGAC
GGCGTCTGGG GCGTGTCGAT CAGCGCTGCA GGTTACCCAA GCTATACACG CACCGATATC
GATATTTATG GTAATGTCTT TGACGACCTG TCGTCCTCGG CGCTGAAGGT CGACAGGCCT
GCATCCGGCT CTTTCTATGA TAATATCATC GACAGCGCGG TGTCGACGTT GACGATGCCG
GTCGCAATTG TCCTCCAGAG CACCTTCTCG ATCAACGACA ATAAGACGCT GGAGCAAGCG
CAGGCCGAAG TCGACGCTGC GACTGGCAAC ACCCAGTCCA ACAATGAGCA GACGCCTACC
ACGCCGGTTG TGGAGCCGTA TGTCGAACCG TCAACACCGA CGCAGACAAG CACTCCGGCG
CCCGCGGCCG AAGCGCAGGT TCCGACCGCA CCCACCGTCG CCGTTCCCAG GATTGTCGCA
GCCCATGACA GCCTGAAAAT CTCCACGGAC ACGGGCAGCG CCTATCATGG CAACCTTCTC
GAAAACGATA GCGCAATCAA TGGAACCGTG CTGCTTCGTC GCTTCGGTGA CAGTGCAGTG
GATAAGCATG GCCTGACGCT GACCGGGAAA TACGGCGTCA TCCACGTGGA GAGCGATGGT
GATTACACCT ATACCGTCGA TGCGGTGAAA ATCGCCGGTC TCAGCGGAAA GGTCAGTGAA
TCCTTCCAAT ACAAGATTTC TGACGGCGCT TCTCACATCG ATACCGACTC GCTCGGCGTG
TATATCAATG TGGACGCGTT CCATAGCAGC CAAGCGTCGC ACCTGCTGGT TTGA
 
Protein sequence
MTVYYVNSAT GSNQNSGVSE QSAFATLSAV ESLRLKPGDS VLLAAGSVFN EQFDLKYSGT 
VSSPITIGSY GVGDAPVIHS SNDGIHGSKA SNIIVENIKI ADTGGAAIYA GNVSNWTVRN
VEVENTGLAG KPGSVNFQSS QNITIENSKI SGVNGDGIWM DKVIGVTIVN NLVINSQGAA
ADAVQLNDSS NILIKGNHLE QTETNSAKGV LVLVRAVDAA VEDNTVIGGG FGIGANAGTN
IAIHDNDISG YGGYSWSYGI GLGDQGNATN YDISGNYIHD GVWGVSISAA GYPSYTRTDI
DIYGNVFDDL SSSALKVDRP ASGSFYDNII DSAVSTLTMP VAIVLQSTFS INDNKTLEQA
QAEVDAATGN TQSNNEQTPT TPVVEPYVEP STPTQTSTPA PAAEAQVPTA PTVAVPRIVA
AHDSLKISTD TGSAYHGNLL ENDSAINGTV LLRRFGDSAV DKHGLTLTGK YGVIHVESDG
DYTYTVDAVK IAGLSGKVSE SFQYKISDGA SHIDTDSLGV YINVDAFHSS QASHLLV