Gene Rleg_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3216 
Symbol 
ID8014110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3218357 
End bp3219859 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content58% 
IMG OID644825777 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_002977004 
Protein GI241205908 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTG TTACCGATCG ACTGATTCAA GGCAGCATGT GGCTGAGCCT ATCCCGCGCC 
ATCGTCAACG GGCTCTCGGC GCTCAGCACC TTCGTTCTCG CCTGGTACCT CGCACCGGCC
GACTTCGGTC TCGTTGCCAT TGCAACGACG ATCCAGGTCA TCTTGAGCTC CGTCACCGAA
CTCTCACTCA ACCAGGCGCT CATTCGTCAC GAGGCGCCGA GCGAGGTTCA TTTCAGTGCG
GTTTGGACGT TGAGCGTCAC AAGAAGTGCG ATCTTGGCGT TGCTGTTTGC CGCCAGTGCC
TATCCAATAG CCGAATTTTA TAACGAGCCC CGGCTGACAA GCGTCATGCT TGCTTTGAGT
TTCAGCTTGC TCCTGAGTGG TCTCGCCAAT CCGCGTCGCG TCATGCTCCA GCGTGATCTG
ATCTTCTGGC AAGAATTCGT TCTCAACGTG TCGCAAAAGC TGGTTGGCTT TGTCGTGACG
GTGGCAATCG CTGCCATCTA CCAGAGCTAC TGGGCTCTCG TTCTTGGTAC CCTCGCCTAT
CAGATTACCA ATATCATCGT TTCCTACACC GTCTTGCCAT TCTGGCCACG GGTGACCTTC
CGGCATGCAC GAGAATTGTT TTCGTTCTCG CTCTGGCTGA CGGCCGGACA GATCGTCAAC
ACCCTGAACT GGCGGGTCGA GTATCTGTTA ATTGGCAAGA TGCTGGGCGC CACGCAGCTC
GGCCATTATA CCGTCGGCAA CACCCTTTCG ACTCTGCCGA CGCGCGAGGC GACGGCGCCG
TTGAACCAGA CGATTTACCC GGGCTTTTCG AAAGTCCGCA ACGACCCGGT CCGGCTTGTC
GCCGCCTATC AGCGTGCACA GGCGCTTCTG GCGGCGGTGG CGCTTCCGGC CGGAATCGGG
ATGGCAGTCG TAGCTGATCC GATGATGCGG CTTGCCTTGG GGGAAAAGTG GGTTCCCGCC
ATCTTCATCG TACAGGCACT CGCATCGGTT TTCGCTCTGC AGACCCTCGG TTCGCTCGTC
CAACCGCTGG GCATGGCAAA GGGCCATACC AAGATGCTGT TCATCCGCGA CACGCAGATG
CTGGTGGTCC GCGTGCCCAT CATCATCGCC GGTCTGATGA TGGCCGGGCT TCCGGGCGTC
GTTTATGCCC GCGTGTTGAC GGGTCTGATT TCCACCGTAG TCAACATGCT TCTGGTCAAG
CGCTTGATCA ATCTGCCATT CTTCCAGCAG CTCGCGGCAA ACTTCCGCGC GCTTGCCAGC
GTTGCCTTGA TGGCTGCCGG CGTCTGGGGA TTGTCGCATC TTCTGAACAC CCCTACCGAC
AAGCTGGCGC TGGCACTCCA CCTGGCCATC CTCGTCGTCA CCGGCGGCAT TCTCTATCTC
GGTTCCAGCT TTGTCCTTTG GCTCGCGATG AAGAAGCCAA ATGGCCCGGA AACCGAAGTT
CAGCGTATCT TTGTCAAGTT CCTGTCAAAA GCCAAACGTA TGGCCGTACC CAAGTCGGCC
TAA
 
Protein sequence
MSSVTDRLIQ GSMWLSLSRA IVNGLSALST FVLAWYLAPA DFGLVAIATT IQVILSSVTE 
LSLNQALIRH EAPSEVHFSA VWTLSVTRSA ILALLFAASA YPIAEFYNEP RLTSVMLALS
FSLLLSGLAN PRRVMLQRDL IFWQEFVLNV SQKLVGFVVT VAIAAIYQSY WALVLGTLAY
QITNIIVSYT VLPFWPRVTF RHARELFSFS LWLTAGQIVN TLNWRVEYLL IGKMLGATQL
GHYTVGNTLS TLPTREATAP LNQTIYPGFS KVRNDPVRLV AAYQRAQALL AAVALPAGIG
MAVVADPMMR LALGEKWVPA IFIVQALASV FALQTLGSLV QPLGMAKGHT KMLFIRDTQM
LVVRVPIIIA GLMMAGLPGV VYARVLTGLI STVVNMLLVK RLINLPFFQQ LAANFRALAS
VALMAAGVWG LSHLLNTPTD KLALALHLAI LVVTGGILYL GSSFVLWLAM KKPNGPETEV
QRIFVKFLSK AKRMAVPKSA