Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3216 |
Symbol | |
ID | 8014110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 3218357 |
End bp | 3219859 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644825777 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_002977004 |
Protein GI | 241205908 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGTG TTACCGATCG ACTGATTCAA GGCAGCATGT GGCTGAGCCT ATCCCGCGCC ATCGTCAACG GGCTCTCGGC GCTCAGCACC TTCGTTCTCG CCTGGTACCT CGCACCGGCC GACTTCGGTC TCGTTGCCAT TGCAACGACG ATCCAGGTCA TCTTGAGCTC CGTCACCGAA CTCTCACTCA ACCAGGCGCT CATTCGTCAC GAGGCGCCGA GCGAGGTTCA TTTCAGTGCG GTTTGGACGT TGAGCGTCAC AAGAAGTGCG ATCTTGGCGT TGCTGTTTGC CGCCAGTGCC TATCCAATAG CCGAATTTTA TAACGAGCCC CGGCTGACAA GCGTCATGCT TGCTTTGAGT TTCAGCTTGC TCCTGAGTGG TCTCGCCAAT CCGCGTCGCG TCATGCTCCA GCGTGATCTG ATCTTCTGGC AAGAATTCGT TCTCAACGTG TCGCAAAAGC TGGTTGGCTT TGTCGTGACG GTGGCAATCG CTGCCATCTA CCAGAGCTAC TGGGCTCTCG TTCTTGGTAC CCTCGCCTAT CAGATTACCA ATATCATCGT TTCCTACACC GTCTTGCCAT TCTGGCCACG GGTGACCTTC CGGCATGCAC GAGAATTGTT TTCGTTCTCG CTCTGGCTGA CGGCCGGACA GATCGTCAAC ACCCTGAACT GGCGGGTCGA GTATCTGTTA ATTGGCAAGA TGCTGGGCGC CACGCAGCTC GGCCATTATA CCGTCGGCAA CACCCTTTCG ACTCTGCCGA CGCGCGAGGC GACGGCGCCG TTGAACCAGA CGATTTACCC GGGCTTTTCG AAAGTCCGCA ACGACCCGGT CCGGCTTGTC GCCGCCTATC AGCGTGCACA GGCGCTTCTG GCGGCGGTGG CGCTTCCGGC CGGAATCGGG ATGGCAGTCG TAGCTGATCC GATGATGCGG CTTGCCTTGG GGGAAAAGTG GGTTCCCGCC ATCTTCATCG TACAGGCACT CGCATCGGTT TTCGCTCTGC AGACCCTCGG TTCGCTCGTC CAACCGCTGG GCATGGCAAA GGGCCATACC AAGATGCTGT TCATCCGCGA CACGCAGATG CTGGTGGTCC GCGTGCCCAT CATCATCGCC GGTCTGATGA TGGCCGGGCT TCCGGGCGTC GTTTATGCCC GCGTGTTGAC GGGTCTGATT TCCACCGTAG TCAACATGCT TCTGGTCAAG CGCTTGATCA ATCTGCCATT CTTCCAGCAG CTCGCGGCAA ACTTCCGCGC GCTTGCCAGC GTTGCCTTGA TGGCTGCCGG CGTCTGGGGA TTGTCGCATC TTCTGAACAC CCCTACCGAC AAGCTGGCGC TGGCACTCCA CCTGGCCATC CTCGTCGTCA CCGGCGGCAT TCTCTATCTC GGTTCCAGCT TTGTCCTTTG GCTCGCGATG AAGAAGCCAA ATGGCCCGGA AACCGAAGTT CAGCGTATCT TTGTCAAGTT CCTGTCAAAA GCCAAACGTA TGGCCGTACC CAAGTCGGCC TAA
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Protein sequence | MSSVTDRLIQ GSMWLSLSRA IVNGLSALST FVLAWYLAPA DFGLVAIATT IQVILSSVTE LSLNQALIRH EAPSEVHFSA VWTLSVTRSA ILALLFAASA YPIAEFYNEP RLTSVMLALS FSLLLSGLAN PRRVMLQRDL IFWQEFVLNV SQKLVGFVVT VAIAAIYQSY WALVLGTLAY QITNIIVSYT VLPFWPRVTF RHARELFSFS LWLTAGQIVN TLNWRVEYLL IGKMLGATQL GHYTVGNTLS TLPTREATAP LNQTIYPGFS KVRNDPVRLV AAYQRAQALL AAVALPAGIG MAVVADPMMR LALGEKWVPA IFIVQALASV FALQTLGSLV QPLGMAKGHT KMLFIRDTQM LVVRVPIIIA GLMMAGLPGV VYARVLTGLI STVVNMLLVK RLINLPFFQQ LAANFRALAS VALMAAGVWG LSHLLNTPTD KLALALHLAI LVVTGGILYL GSSFVLWLAM KKPNGPETEV QRIFVKFLSK AKRMAVPKSA
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