Gene Rleg_3168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3168 
Symbol 
ID8014067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3169350 
End bp3170174 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content62% 
IMG OID644825734 
Producttransglutaminase domain protein 
Protein accessionYP_002976962 
Protein GI241205866 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.837048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGA AGATCAGCCA CCTCACCGAA TACCGCTACG ACGAACCGGC GCAGTTCTCG 
CTGCAACGGC TGCGGCTGAC GCCGCCAACG AACTCCACTC AAAAAGTACT CGGCTGGGCC
CTGAAGGTCG AGGGCGCTAC GCCGGAGGTC GAATATGACG ACCAGTACGG CAATCACGTC
AATCTAGTCT CGCTGGAAGG CGAACAAGAG GTGACGCGTA TCCTCGCCGA AGGCGAGGTC
GAGACGGGGG ACAACAACGG CGTCACCGGT CCGCATACCG GCTTCTGCCC GCTTTGGCTC
TTCCTGCGCG ACACACCGCT GACAAAGGGT GGCAAGCTGG TGAAGGAACT GATCAAGGGC
GTCGGTGGCG ATAACGAGCT CGCCCGCATG CATGCGCTGA TGGCGGCGAT CCACGAAACG
GTCGATTATA GGCCCGGCAC CAGCAATACC GAGACGACGG CCGAGCAGGC GCTGGAGAGG
AAGAGCGGCG TCTGTCAGGA CCATGCGCAT ATTTTCATCG CCGCCGCCCG CGCCCTGCAG
GTGCCGGCGC GTTACATCTC CGGTTATTTG ATGATGGAGG AAAAGATCGA ACAGGCGGCG
ACCCATGCCT GGGCAGAGGC CCATATTCCC GGCCTCGGCT GGGTCGGCTT CGATCCCGCC
AACGAGATCT GCCCGGATGC CCGTTACATC AGAGTCGCCT CCGGCCTCTG CTATCGTGAT
GCCGCGCCGA TTTCAGGCAT GCGCATCGGC ACGCCGGGCG AAACGCTGAC GGTCACCGTG
AAGGTCGAGG ACGGCGGACA GATGCAAAGC CAGAGCCAGA GCTGA
 
Protein sequence
MRLKISHLTE YRYDEPAQFS LQRLRLTPPT NSTQKVLGWA LKVEGATPEV EYDDQYGNHV 
NLVSLEGEQE VTRILAEGEV ETGDNNGVTG PHTGFCPLWL FLRDTPLTKG GKLVKELIKG
VGGDNELARM HALMAAIHET VDYRPGTSNT ETTAEQALER KSGVCQDHAH IFIAAARALQ
VPARYISGYL MMEEKIEQAA THAWAEAHIP GLGWVGFDPA NEICPDARYI RVASGLCYRD
AAPISGMRIG TPGETLTVTV KVEDGGQMQS QSQS