Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3092 |
Symbol | |
ID | 8015760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 3089784 |
End bp | 3090740 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644825659 |
Product | choline ABC transporter, periplasmic binding protein |
Protein accession | YP_002976887 |
Protein GI | 241205791 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAA CAAGCACGTT CAAACTCGTT ACCGCAACTG CCGTCGCCGC CCTCTCCGTT GCGACCGCCG CCTTCGCCGC CGATCCCGAC AGCTGCTCCA CCGTTCATTT CTCGGACGTC GGCTGGACGG ATATCACCGC CACCACCGCC ACCGCATCCA TCGTCCTGAA GAGCATCGGC TATCAGACCG ACGTCAAGGT TCTCTCCGTG CCGGTCACCT ACACCTCGCT GAAGAACAAG GACATCGACG TCTTCCTCGG CAACTGGATG GAGACGCAGG AGAAGGACGT TCGTCCCTAT CTCGACGACA AGTCGGTCGA ATCCTTCGGC CCGAACCTGG TCGGCGCCAA GTACACGCTC GCCACCAACG CCAAGGGTGC GGAACTCGGC ATCAAGGACT TCAAGGATAT CGCCGCCCAC AAGGACGATC TCGACGGCAA GATCTACGGC ATCGAGCCCG GCAATGACGG CAACCGCCTC GTCATGGACA TGATCGAGAA GAACGAGTTC GACTTGAAGG ATATGGAAGT CGTCGAATCC TCCGAACAGG GCATGCTCGC CCAGGTCGCG CGTGCCGACA AGTCAGGCAA GCCCGTTGTT TTCCTCGGCT GGGAGCCCCA CCCGATGAAC ACCAACTTCA AGCTGACCTA CCTCACAGGC GGGGACAAAG TGTTCGGCCC CGACTTCGGC GGCGCCAAGG TCTTCACCAA CGTGCGTGCC GGTTATCTCG ACGAATGCCC GAATGTCGGC ATGATGTTGA AGAACCTGAA ATTCTCCCTC GACATGGAGA ACCAGATCAT GGGCAAGATC CTCAACGACG GCAAGGAGCC GGAGGCTGCA GCTTCCGAAT GGCTGAAGGC GAACCCCGCA GCGCTCGAAC CCTGGCTCGC GGGCGTCAAA ACCCGCGACG GCAGCGGCGA GGCTCTCGCG GCCGCCAAGA CCGGCCTCGG CCTCTGA
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Protein sequence | MKTTSTFKLV TATAVAALSV ATAAFAADPD SCSTVHFSDV GWTDITATTA TASIVLKSIG YQTDVKVLSV PVTYTSLKNK DIDVFLGNWM ETQEKDVRPY LDDKSVESFG PNLVGAKYTL ATNAKGAELG IKDFKDIAAH KDDLDGKIYG IEPGNDGNRL VMDMIEKNEF DLKDMEVVES SEQGMLAQVA RADKSGKPVV FLGWEPHPMN TNFKLTYLTG GDKVFGPDFG GAKVFTNVRA GYLDECPNVG MMLKNLKFSL DMENQIMGKI LNDGKEPEAA ASEWLKANPA ALEPWLAGVK TRDGSGEALA AAKTGLGL
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