Gene Rleg_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3087 
Symbol 
ID8013997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3085271 
End bp3085996 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content58% 
IMG OID644825654 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_002976882 
Protein GI241205786 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTACA TGACTACCTC TGAAAGACAG TCATTGCTTT CGGCAGAGCT TGCGACCGCA 
CGAACGCGCA GCCTGTTTGC GCAGGCGCTC GGCAGGGTCT CCACAGCCTT CGGATTGTCG
CATGCGACGC TAATGCACGC TCCCTCCCCC GAAGACCTCC TCCTGAAACC CCTGCTGATT
GAGAGCTCGC TTCCTGTCGC CTATGTCAGG GATTTCGACC GCGCCCACAT GATGCGCGGC
TGCCCTTTCG GCGTAAGGCT GAGGCAGTCT GCTGTGCCGC CGGCATGGCA CCTCAACGAC
GCCTCCAATG GTCAGGCTTT CCCCGCCGAA CTTCGTGCCC TGATGCTGCG CCATGCCATA
CCGGCAGGCG TTGCCATGCC GACCATTGCA GCCGACGGCC AGCGCCTGGT CTTTTGGTTC
TGCGGCGAGC GCGCCGCACT TGGCCAGAGT GAGACCAACG AGCTGGCAAT GATCATTCTC
CATGCACTTG ATGCATACAA TGCAGTCAAA CGTAACGAGG AATGCGCGCA TAACGCGCTA
TCAACCAGAG AACTAGAAGT TGTTCGCTGG ACTGCCCAGG GCAAGACCTC GATCGAAATC
GGTCAGATCC TCACGCTCTC GGACCATACG GTGAACGCCT ATATGACGAA CGCGATCAAA
AAACTCGATT GCGTCAACCG GACCCAGTTG GTAGCTAAGG CCATTCGATT GAAGCTGATC
AACTGA
 
Protein sequence
MSYMTTSERQ SLLSAELATA RTRSLFAQAL GRVSTAFGLS HATLMHAPSP EDLLLKPLLI 
ESSLPVAYVR DFDRAHMMRG CPFGVRLRQS AVPPAWHLND ASNGQAFPAE LRALMLRHAI
PAGVAMPTIA ADGQRLVFWF CGERAALGQS ETNELAMIIL HALDAYNAVK RNEECAHNAL
STRELEVVRW TAQGKTSIEI GQILTLSDHT VNAYMTNAIK KLDCVNRTQL VAKAIRLKLI
N