Gene Rleg_2799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2799 
Symbol 
ID8015723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2780675 
End bp2781640 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content61% 
IMG OID644825370 
ProductHflC protein 
Protein accessionYP_002976599 
Protein GI241205503 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01932] HflC protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.565333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGA ACAGACTTCC CATCATTCTT CTCATCGTCG CCATCGTTTT GGTCGGGCTC 
TATTCGTCCA TCTTCGTGGT GAATGCACGT GAGCAGGCCA TCGTCGTCCG TTTCGGCCAG
ATCCAGTCGG TCAAAACCGA GCCGGGCATT TATTTCAAGC TGCCCTTCGG CTTCATGGAT
GCCGACCGCG TTCAGCTGGT CGAAAAGCAG GCGCTGAGGC TCGATCTCGA CAATATTCGC
GTTCAGGTCC AGGACGGTCA GACCTTCGAC GTCGATGCCT TCGTGATCTA CAACATCTCG
GATGTCCGCC GCTTCCGCGA AACGGTATCG GGCGATCGCG AAGCCGCGGA AGCGCGGTTG
AGAGCCCAGC TCGATTCATC GCTTCGTCGC GTCTACGGTC TGCGTGACTA CAATGCTGCG
CTCTCGGAAG AGCGTGTCGC GATGATGCTG GAGATTCGCG ACGACCTGCG CACAGATGCC
GAAAATCTCG GCCTGCATAT AGACGATGTT CGTATCCGCC GCACCGACCT TTCGCCGGAG
GTTGCGCCCA ACACCTATAA TGCCATGCGG TCGGAACGTC TCGCCGAGGC GGAGCGTATC
CGTGCGGAGG GTAATGAGGA AGGCCAGCGG CGCCGGGCCG TCGCCGACCG TCAGGTCGTC
GAGTTCACCG CAGGCGCCCA GCGCGATGCG GAAATCCTTC GAGGCCGGGG CGATGCGGAA
CGCAACCGCG TCTTCGCCGA AGTCTTCAGC AAGGATCCAG CCTTCTTCGA GTTCTATCGC
TCGATGGCGG CCTATTCCTC CGCTCTCTCG TCGCAGGACA CGACGCTGGT GCTGTCGCCG
AATTCGGAAT TCTTCCGCTA TTTCGACAAT GCCGCCGGCA CCCTGCAGTC GGCAAATCCG
GCTGCACCGG TTCCGGCAGT TCCCGGCGCC GCTGTTCCCG CTGCACCGGC CCAGCCGACG
AACTGA
 
Protein sequence
MTSNRLPIIL LIVAIVLVGL YSSIFVVNAR EQAIVVRFGQ IQSVKTEPGI YFKLPFGFMD 
ADRVQLVEKQ ALRLDLDNIR VQVQDGQTFD VDAFVIYNIS DVRRFRETVS GDREAAEARL
RAQLDSSLRR VYGLRDYNAA LSEERVAMML EIRDDLRTDA ENLGLHIDDV RIRRTDLSPE
VAPNTYNAMR SERLAEAERI RAEGNEEGQR RRAVADRQVV EFTAGAQRDA EILRGRGDAE
RNRVFAEVFS KDPAFFEFYR SMAAYSSALS SQDTTLVLSP NSEFFRYFDN AAGTLQSANP
AAPVPAVPGA AVPAAPAQPT N