Gene Rleg_2501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2501 
Symbol 
ID8013473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2506623 
End bp2509451 
Gene Length2829 bp 
Protein Length942 aa 
Translation table11 
GC content56% 
IMG OID644825081 
ProductCadherin 
Protein accessionYP_002976311 
Protein GI241205215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.390828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.873412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTGA ATATTCTGGA CACGAACGGC GCTACAGTTA TCAAGACCGG TGCGCAGTTC 
GAGGCGTACG ACGTCATCCG CTACTCCGCC GATAATCCTC TCGCCATGGT CACTCTGAAG
GTGTCGGATT TCGGCACGAT AAACCTTGCC GATGAGTTGG ACTCGGTTTC CGCAGAAATA
ACGGGCTCGA GCAGTGCCAA TGCGATTACA ACCGGCAGGG GCAACGACAC TATATCGGGC
GGAAATGGCA ATGACACGCT GAATGGCGGA GAAGGCAACG ATACGCTAAA TGGCGACGAT
GGCGCAGACA CGCTGAACGG CGGTGCCGGA GAAGATACGA TCCGAGGTGG AGCTGGTAAT
GACACGCTGA ATGGCGGGGA CGGCAACGAC ACGCTCGACG GCGGGCAAGG TAATGACAAG
ATCAATGGTG GCGCGGGCAA TGACACGATC ACCGACTCTG CGCACTTTAA CACACCGAAA
ACGACGATCG ATGCAGGGGA CGGCGACGAC AAAGTAATTA TATTAGCAAG CGATGAATCG
CTGACAGGGG CGATCGATGG CGGCAACGGG ATCGACGTTC TTTCCGGCTT GAACAATCTG
ACCGCTTTTA CGATACAGAA CTTCGAAATT CTTGAAACGG GAGGGATCCA CCTTGCCGGT
TCGGCTGCTC AGTTCGAAAG CTTCGACAAG ATCATCTACG GTGACAATCC GATCTACGAC
AGTTCCGTCA TCTCCTTGAT ATTGGCGGAT GGCGTTCATG TCGATCTCTC CGACGAGCTG
GCAGCCCGTC GGACCTCCAT CACAGGCACC GCCTTCGGCA TAGACGTCAC GACGGGCGCC
GGTAATGACA ATTTCGTCGG AACAGCCGGT AACGACATTT TCGACGGCGG CGCCGGCAAC
GACACATTGC ATGGCAATGC TGGAAATGAC CTGTTGACCG GCGGCGAAGG CAACGACCAA
GTCTATGGGG GCGCCGGAAA TGATGTGATC AGGGGTGGAA CGGGTAACGA CACGATCGGC
GACGGTGACT TTTTCGGCCC TCCAGAAGTC TTCGATATAG ATGGGGGCGA CGGCAATGAT
ACCGTGAACC TGCAGATCGC ATACAGTATC GAAAATTCGG GAATAGTTGA TGGCGGTGCC
GACACCGACA CGCTGCAAGC CTATAATCTG ACCGGCTTGA CGATCAAGAA TTTCGAAATT
CTTGAGACGG GGGGAATGGA AACTATTGGT TCGGCGGCGC AGTTTGAAAG CTTTGAAAAG
ATCGTCGTCT ACGACGATCC AAACTACGAT AGCTATGCCA TCTCGTTGAA ATTGACGGAC
GGGGTTCACG TCGACCTTGC TGGTGAACTG GCCACCCGTT CGGCGCATAT CAGCGGCAAT
GCCTTCGGCA TCGACGTCAC GACCGGTGGC GGCAATGATC AACTTGAAGG TACTGATGGC
AACGACATTT TCGACGGCGG CGCCGGCAAT GACGTTATCG ATGGCTACTC CGGCAATGAC
GTCCTGAGAG GCGGTGCGGG CGATGATACG ATCACCGATG GTGACGACTA CGCCGATGCA
AAAATCTTCG ATATAGATGC AGGCAACGGC AACGACACCG TAACTGTGTT TCGCGGCTCC
GATGTCGAGG CGTCCGGAAC ACTCAATGGC GGTGCCGACA CCGACACGCT GCAAGCCTAT
AATCTGAGCG GCCTGACGAT CCAAAATTTC GAAATCCTCG AATTGGGCGG AGCGGGCGCT
ATTGGTTCGG CTGCGCAGTT CGAAAGTTTC GACAAAATCG TAGTCTACGA GCCGGGATAC
GAAAGCATCA TCTCCTTGAC ATTGACCGAC AGTGCCCATG TCGATCTCTC GGACGAGTTG
GCCACCCGTT CGGCATATAT CAGTGGCACG GCCTTCGGTA TTGACGTCGC GACCGGTGGC
GGCAGCGACC AACTTGAAGG CACCGATGGT AACGACATAT TCGACGGTGG AGCTGGTAAT
GACAGAATTG ATGGCTATGG CGGGAACGAC ATGCTCTTTG GAGGCACCGG CATCGACACG
GCCGTCTTCT CCGGCGATTT CGCCAGCTAT TCCTTCGCGA TCGACAATGG CAGCCACATC
CTGACGAGCG CCCTGGAGGG CAAGGATACG CTGACTGATG TTGAATTCGC CCGTTTTGCC
GACGGCGTCT ACGATTTCGC CACGGAAACT TTCACAAGCA ATAACACCGC GCCGACCAAT
TTCCAGCTTT CGAAGACCGC CCTCTCAGAG GACACGCCGA TCTGGACCAC CGTTGGCCTG
CTCAGCGCCA AGGACGCCGA TGGCGACGCC CTCACCTATA CGCTGCTCGA CGGAGCCAAC
GATCATTTCC GGATAAAGGG CGACCGTATC GTCACCTCCA AGGCGCTGGA TTACGAGACC
GACAAGTCGC ACACGATCAA GGTTGCCGTT TCCGACGGCA AGGTCACGGT CGAAAAGGAC
ATCACGATCA ATGTCCTCGA CGTCAACGAA GCACCTGTCA ACAAGGCGCC GACCAATCTC
GCCTTCTCGC GCAGCTCGAT CTCCGAGAAT GTCGCGATCG GCACCTCGGT CGGCCTTCTC
TCGGCGGTCG ATCCAGAAGG CGGCACGGTA AAATGGCGGC TGACGGATGA TGCCGACGGC
ATCTTCAAGC TCGTCGGCAA CAAGATCCAG ACGAAGGCTG CAATCGACTA CGAAAGCACC
CACAACCTGA CCTTCACTGC CGAAGCCTAC GACACGGCCG GAAACGTCAC CAGCCACGAT
TTCACGGTCG CCGTGAAGGA CGTCTTCGAG CCGGCGGTTT CGAGCTTCTC GCATGAGGCG
TTGATCTAA
 
Protein sequence
MALNILDTNG ATVIKTGAQF EAYDVIRYSA DNPLAMVTLK VSDFGTINLA DELDSVSAEI 
TGSSSANAIT TGRGNDTISG GNGNDTLNGG EGNDTLNGDD GADTLNGGAG EDTIRGGAGN
DTLNGGDGND TLDGGQGNDK INGGAGNDTI TDSAHFNTPK TTIDAGDGDD KVIILASDES
LTGAIDGGNG IDVLSGLNNL TAFTIQNFEI LETGGIHLAG SAAQFESFDK IIYGDNPIYD
SSVISLILAD GVHVDLSDEL AARRTSITGT AFGIDVTTGA GNDNFVGTAG NDIFDGGAGN
DTLHGNAGND LLTGGEGNDQ VYGGAGNDVI RGGTGNDTIG DGDFFGPPEV FDIDGGDGND
TVNLQIAYSI ENSGIVDGGA DTDTLQAYNL TGLTIKNFEI LETGGMETIG SAAQFESFEK
IVVYDDPNYD SYAISLKLTD GVHVDLAGEL ATRSAHISGN AFGIDVTTGG GNDQLEGTDG
NDIFDGGAGN DVIDGYSGND VLRGGAGDDT ITDGDDYADA KIFDIDAGNG NDTVTVFRGS
DVEASGTLNG GADTDTLQAY NLSGLTIQNF EILELGGAGA IGSAAQFESF DKIVVYEPGY
ESIISLTLTD SAHVDLSDEL ATRSAYISGT AFGIDVATGG GSDQLEGTDG NDIFDGGAGN
DRIDGYGGND MLFGGTGIDT AVFSGDFASY SFAIDNGSHI LTSALEGKDT LTDVEFARFA
DGVYDFATET FTSNNTAPTN FQLSKTALSE DTPIWTTVGL LSAKDADGDA LTYTLLDGAN
DHFRIKGDRI VTSKALDYET DKSHTIKVAV SDGKVTVEKD ITINVLDVNE APVNKAPTNL
AFSRSSISEN VAIGTSVGLL SAVDPEGGTV KWRLTDDADG IFKLVGNKIQ TKAAIDYEST
HNLTFTAEAY DTAGNVTSHD FTVAVKDVFE PAVSSFSHEA LI