| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_2492 |
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| Symbol | |
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| ID | 8013467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 2492773 |
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| End bp | 2494512 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644825072 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_002976302 |
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| Protein GI | 241205206 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCTG AAGAATTGCG CAGATCGGAA TATGCCTACA ACAAACGTAA ATTGCTCCTG
ATCTTCCTGG TTATAGTTGC CATCACGGCA GGAATCATTT GGCTAGGCTT CCATCCACCT
GGGGATAAGG ACCCTCGTGT GGCTTGGTTC TTCGTGGTGC CGGGTGCAGC GTTTTTTGGC
ATCCTAGCAT TGCTGCTGCT GCCCAAGCTA TTCTCCGTGG AGCCGGGACT CGTCATGTCG
ACGGCCGGAA TCCGTTTGCC GAATTTCCCC GGCCAGATAC TGCCGTGGTC TGCCATTCAA
AGCATTGGCA GAGTCCAGAC CAAATATGCG GATAACATCA TTCTTCACCT TGATCCCACT
GCCGCCAGGA CCTTGGTCAG ACGGGGGCTG ACGAGCCGGC TGCCGGAATG GTTTGTTGGT
TCACGCGCCA AGGTCGGCGT TGCTCTGAAG CTCTTGCGGG GCAATTCGGA CAGGATATTC
GATGAGTTCG TCGAATTGCT GTCCGAAGCT TACGAAGCCG AACGCCAAAC CATGCAGGAA
GATGGCTCGA CCGCCCCGGA TGATGAAGAC GAAGCGTTGG AACCCGCTCT CAACAGCGGC
GGGCATCCTA TATTCACCTA CATTCTTCTC GCCACTCTGA TTGCGGTCTA TGCCGGCGAA
CTAACCTTCG GTCTCGAGCC GCCCGTCGCC GGCACTCCCA CCAATTGGAC TCTCTTCGTC
CTCGGTGGGA CGTTTCGTCA AAGCATTGTC GAGCATGGTC AATGGTGGCG GCTGTTTACC
GCACCCTTCA TGCATGGAGG TATCCTCCAT CTCGCGTTCA ATTGCGTTTC CTTATGGTTC
GCAGGAGGGC TCTTTGAACG GCTGATCGGC TGGCGCTGGT TTGCAGCGAT TTTTTTCGCA
AGCGCGCTTG GCGGGTCTGT CGCATCGGTG TGGATCAATG CGCCGAACAC GATCGGGGTC
GGCGCCTCCG GCGGGATTGT CGGTCTTTTT GCAGCCGTGA TCGCTGCCAG CTTCCGTTTC
CGCTCAGGGC CGATTGCAGA TACCCTGCGG ATCGGGGCAG CTCAAATTCT CATTCCCTCC
CTGCTGCCAT TCCTTTCGGC AGCAAGAGGC GGTGAGAACA TCGATTATGC CGGACATTTC
GGCGGCGCCT TGATCGGGGC CGCGCTATCG TCGCTGCTGT TGGCTTTCTG GCCGAGAGAA
CGCCCGACGC CTCGTTTCGG CGCGGCGGCG ACAGCCTTCA GCACTCTGTT CGTTATTATA
GCGGCGGCAT CGCTTTGGCC GATCAGCAAT ACACGTCAAT TCATCGTCAA TGACCCCATG
GCGAACTATT TCGCAGGAAA GTACGAGCAA GCCGCGACAG GGTTCGCCAT TAGGACAACC
GAGAATCCCC CGACGGCTCC CTATTATCAT CTCTGGCGCT TTATGGCTCA AAGCCGGGGC
AATGATACAA AGGCAATCGC CGATCTCAAG ATCGCGGCCA GTAAAACCGA CCAGGGAACA
TGGCCCTATC CCGTTTTCAG TCTCTTTCTC GGCGATTTGA AACCAGATGA ACTGATGGCG
AAGGCGGCCG ATAGCAACCA GCGTTGCGAG GCCACATTTT ACAATGGCGA ATGGTATCTG
TTGGGCGGCA ACACCCAGGA GGCGCGCCGA CGTTTCGAGG CCGCCTTGTC CTCCTGCCCC
ACGACATACA TGGAATATGA CGGCGCGAAG GGTGAATTGA ACAGCCTCGG CGTGCAGTAA
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| Protein sequence | MTSEELRRSE YAYNKRKLLL IFLVIVAITA GIIWLGFHPP GDKDPRVAWF FVVPGAAFFG
ILALLLLPKL FSVEPGLVMS TAGIRLPNFP GQILPWSAIQ SIGRVQTKYA DNIILHLDPT
AARTLVRRGL TSRLPEWFVG SRAKVGVALK LLRGNSDRIF DEFVELLSEA YEAERQTMQE
DGSTAPDDED EALEPALNSG GHPIFTYILL ATLIAVYAGE LTFGLEPPVA GTPTNWTLFV
LGGTFRQSIV EHGQWWRLFT APFMHGGILH LAFNCVSLWF AGGLFERLIG WRWFAAIFFA
SALGGSVASV WINAPNTIGV GASGGIVGLF AAVIAASFRF RSGPIADTLR IGAAQILIPS
LLPFLSAARG GENIDYAGHF GGALIGAALS SLLLAFWPRE RPTPRFGAAA TAFSTLFVII
AAASLWPISN TRQFIVNDPM ANYFAGKYEQ AATGFAIRTT ENPPTAPYYH LWRFMAQSRG
NDTKAIADLK IAASKTDQGT WPYPVFSLFL GDLKPDELMA KAADSNQRCE ATFYNGEWYL
LGGNTQEARR RFEAALSSCP TTYMEYDGAK GELNSLGVQ
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