| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_2332 |
|---|
| Symbol | |
|---|
| ID | 8013325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 2334537 |
|---|
| End bp | 2335298 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644824915 |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_002976145 |
|---|
| Protein GI | 241205049 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.43019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAC TCAGCTACCA GCTCTATAGC GCCCGCAACT TCCAGCCCTA TTCGGCGATC
TTCGAAAAGC TCGGCAAATC AGGTTATGCC GAAGTCGAGG GCTTCGGCGG TATCTATGCC
GATCTCGACG ATGCCGGGCT GAAGAGCCTT CGCGCTGAAC TCGACAAGAA TGGCCTGGTC
ATGGCGAGCG GCCATTTCAG CCCCGATTTC CTGGAGAAGG AAGTTCAGAA GTCGCTGAAC
ATTGCCAAGA TCCTCGGCAT GGATTCGATC TATGCGCCGC ATCTGGCGGC CGAGGAACGG
CCATCCGACG CTGCCGGCTG GGCCGCCTTC GGCAAGCGCC TGCAGGAAAT CAGCAAGCCT
TACAAGGCTG CCGGCTACGA ATTCGGCTGG CACAATCATG ATTTCGAATT CTTCAAGCTG
CAGGACGGCT CGCGGCCGAT CGAGCACATC TTCGAAGGCG CGCCCGACAT TTCCTGGGAA
GCCGATATCG CCTGGGTCAT CCGCGGCGGC GCCGATCCCT TCGCCTGGAT CGCGAAGCTC
GGACCGCGCA TCACCGCCGT GCATGTCAAG GACATCGCAC CGGCCGGCGA AGCGACGGAT
GAGAGCGGAT GGGCCGATGT CGGTCACGGC AAGGTCGAGT GGGCCAGGCT GATGACAGCG
TTGCGCGCCA CCAAGGCCAA GCACTACGTC GTCGAACACG ATAACCCGAA TGACATCGAC
CGCAATATCA GCCGCTCGAT CGCATCCTTC CAGAGCTACT GA
|
|---|
| Protein sequence | MTKLSYQLYS ARNFQPYSAI FEKLGKSGYA EVEGFGGIYA DLDDAGLKSL RAELDKNGLV
MASGHFSPDF LEKEVQKSLN IAKILGMDSI YAPHLAAEER PSDAAGWAAF GKRLQEISKP
YKAAGYEFGW HNHDFEFFKL QDGSRPIEHI FEGAPDISWE ADIAWVIRGG ADPFAWIAKL
GPRITAVHVK DIAPAGEATD ESGWADVGHG KVEWARLMTA LRATKAKHYV VEHDNPNDID
RNISRSIASF QSY
|
|---|
| |