Gene Rleg_2241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2241 
Symbol 
ID8013247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2246919 
End bp2247986 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content62% 
IMG OID644824827 
Productdiguanylate cyclase 
Protein accessionYP_002976057 
Protein GI241204961 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGG CTGTCGCGCC CAAGGTGCAG GTTCCCGACG TTGCGGGTCA GATCACCTAT 
GCCATGCGCT CCATGGGCGT TGCGCCGATA CCGCGCAATT ACGAACTCTT CTACGAGGCC
TATATCGGCT CCAATCCAGC CCTGACCCGT GAGCTCGCGG CCCTCGGCGG CCAGGTGACC
CAGGCCGAAC TCGATGCGCT CGGCGCGCAG CACTTCACCC ACAGCCCGGC CCGTGTCTTC
GACGATGCCC ATACGCGCAT ATCGGGCGAA CTCGATGGCC TGCTGCGCAT TCTCAAGCAG
GAGCAGAGCT CGCTCGAAAG TTATACCAGG CTGCTCGGCG AAACCCACAA GCGCATTACT
TCCAAGAGCA ATGCCAGCGT CGAACTGATC GAAAACGCCA TCGATCTGCT GAGCCAGGCA
ACCGGAGACA CAATGGCGCA TGGCGAACGC ACCGTCGAGG ACGTCGTCCA GCGCTCGCAG
GAGATGGATC AGGTCCGCAA GGAACTCGAC GAATACAAGC GCATCGCCAA CACCGACTCG
CTGACCCGCC TTTCCAACCG CCGCGCCTTC GACGACCGCC TCGCCGCCAT CTTCGACAAT
TCGAGCATGC GGCCGGTGAC GGCTCTGCTG CTCTGCGACA TCGACAATTT CAAGAAGATC
AACGACACCT ACGGCCATCC GGTCGGCGAC AAGGTGCTCG CCACCGTCGC CTCCGTCATC
CGCAGCAATG TCCGCCGCGA CATCTTCGTC GCCCGCACCG GCGGCGAAGA GTTCGCCCTC
ATCATCGATG GCAACACGCC CGAGGAAGTC ACCGGCATCG CCGAGCGCAT CCGCCGCACG
CTGGAGACGA CGCCCTTCAA GAATTCCCGC ACGCGGGTAA ATTACGGTCC GGTCACGGTC
TCGATCGGCA TCTGCATGGC CTCCAATGCC GAGGATGCCG GCGAACTCTA CAGCAAGACC
GACATCGCGC TCTACGGCGC CAAGAATGCC GGCCGCAACT GCACCATCCT CTATCAGGAC
GGCATGCAGA AGGATTTCAC CAAGAGCTGG CTGATCTACA AGACCTGA
 
Protein sequence
MNTAVAPKVQ VPDVAGQITY AMRSMGVAPI PRNYELFYEA YIGSNPALTR ELAALGGQVT 
QAELDALGAQ HFTHSPARVF DDAHTRISGE LDGLLRILKQ EQSSLESYTR LLGETHKRIT
SKSNASVELI ENAIDLLSQA TGDTMAHGER TVEDVVQRSQ EMDQVRKELD EYKRIANTDS
LTRLSNRRAF DDRLAAIFDN SSMRPVTALL LCDIDNFKKI NDTYGHPVGD KVLATVASVI
RSNVRRDIFV ARTGGEEFAL IIDGNTPEEV TGIAERIRRT LETTPFKNSR TRVNYGPVTV
SIGICMASNA EDAGELYSKT DIALYGAKNA GRNCTILYQD GMQKDFTKSW LIYKT