Gene Rleg_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2172 
Symbol 
ID8013185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2164767 
End bp2165975 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content68% 
IMG OID644824758 
ProductIntegrase catalytic region 
Protein accessionYP_002975988 
Protein GI241204892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0104319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0206375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTGGA GAGAGACTGG CATCATGGAC GAGCGGCTGC GCTTTGTTGG GGAATGTCTT 
GCGGGCGAGG AGACGATGAC GGCGCTGTGT GCGGCCTACG GGATATCGCG CAAGACGGGC
TACAAATGGT TGGAGCGGTA TCGGGCGCTC GGCCCTGCGG GGCTTATCGA CCTGCCGCGG
GCGCCGCTTG AGCACGGGCG GGCAACGGCG GCGGAGCTGG TGGCGCGGAT CGTGGCGGAG
AAGGAGGCGA ATCCGCAGTG GGGGCCGAAG AAGGTGCTGG CGCGGCTGAA GCGGTCGGCG
CCGCAGCTTT GCTGGCCGGC GGCCTCGACG ATAGGCGAGA TCCTGAAGCG ACACGGGCTG
GTCGGGCGCC GGCGGCATCG CTGGCGGGCG GCTGGTTGCG GCCCGTTCGC GCCGGCCAAC
GGGCCCAATG CGGTGTGGAG CGCCGATTAC AAGGGCTGGT TCAGGACCCG CGATGGGCGG
CGCTGCGAGC CACTGACGGT GATGGATACG GCGAGCCGCT TTCTGCTGGC GCTGGAAGCC
TGCGCGACGC CGGCCGAGGT AGAGGCCTGG CCGGTGTTCG AGCGGCTGTT TGCCGAGCAC
GGACTGCCGG AGCGCTTTCG CAGCGACAAC GGTTCGCCCT TCGCGGCGAT CGGCGTCACC
GGGCTGACGA CGCTTGCTGT ACGGTTCATC AAGCTCGGCA TCGGCCTGGA GCGCATCCAG
CCGGGCAAAC CGCAGCAGAA CGGCCGCCAC GAACGCTTCC ATCTGACGAT GCTGCCGCTG
GCCATGGCGC CGGAGGTCGA CCATGCCGCG CAGCAGGCGG TCTTTGACGC ATTTCGCCAG
AATTACAACG CCGAGCGTCC ACACGAGGCG CTCGCTATGG ACGTGCCTGC TGATCATTAC
CGACCGTCAC TGCGGCGCCT GCCCGACCGC CTGCCTGAAC CGGACTATCC GGCCGAGGCG
GCGGTGCGCC GGGTGCGCTC CAATGGCGAG ATCAAATGGA ACGGTGACCT CGTCTATGTC
GCAGCAGCGC TGGCCGGCGA GGTCGTGGCG ATCGAGGAGA GTGAAGCGGG CATCTGGACG
CTACGCTTCC ATGCCCATCC GCTCGGCATC ATCGACAAGA AGACCAAGCG GCTTGTCCGC
CCCAGCGCCC TGCAACCCCG ACCAGCCGGC GCAGGGGCGG ACACTGGTCT ACAAGGGGGA
GAACTGTAA
 
Protein sequence
MVWRETGIMD ERLRFVGECL AGEETMTALC AAYGISRKTG YKWLERYRAL GPAGLIDLPR 
APLEHGRATA AELVARIVAE KEANPQWGPK KVLARLKRSA PQLCWPAAST IGEILKRHGL
VGRRRHRWRA AGCGPFAPAN GPNAVWSADY KGWFRTRDGR RCEPLTVMDT ASRFLLALEA
CATPAEVEAW PVFERLFAEH GLPERFRSDN GSPFAAIGVT GLTTLAVRFI KLGIGLERIQ
PGKPQQNGRH ERFHLTMLPL AMAPEVDHAA QQAVFDAFRQ NYNAERPHEA LAMDVPADHY
RPSLRRLPDR LPEPDYPAEA AVRRVRSNGE IKWNGDLVYV AAALAGEVVA IEESEAGIWT
LRFHAHPLGI IDKKTKRLVR PSALQPRPAG AGADTGLQGG EL